RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 SBSPONQ8IVN8 264 aa6.33□□□□□ -1.4
HLA-B-258ENST00000640615 RNASE8Q8TDE3 154 aaKnown RBP6.33□□□□□ -1.4
HLA-B-258ENST00000640615 TMEM263Q8WUH6 116 aaKnown RBP6.33□□□□□ -1.4
HLA-B-258ENST00000640615 C16orf74Q96GX8 76 aa6.33□□□□□ -1.4
HLA-B-258ENST00000640615 SSBP4Q9BWG4 385 aaPredicted RBP6.33□□□□□ -1.4
HLA-B-258ENST00000640615 RETNQ9HD89 108 aa6.33□□□□□ -1.4
HLA-B-258ENST00000640615 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
HLA-B-258ENST00000640615 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
HLA-B-258ENST00000640615 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 SNURFLB1AK76 121 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 SNAI2O43623 268 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 CTRLP40313 264 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 EMP1P54849 157 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 CACNG7P62955 275 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 RIGQ13278 110 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 TWIST1Q15672 202 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 MRPL54Q6P161 138 aaKnown RBP6.32□□□□□ -1.4
HLA-B-258ENST00000640615 ZNF493Q6ZR52 646 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 C11orf72Q8NBR9 251 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 OR10AG1Q8NH19 301 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 BTF3L4Q96K17 158 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 C9orf85Q96MD7 179 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 OVOL2Q9BRP0 275 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 SPXQ9BT56 116 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
HLA-B-258ENST00000640615 TRAV9-1A0A075B6T8 112 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 IGHV4-28A0A0C4DH34 117 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 M0R2P5 195 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 M0R381 172 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 MIFP14174 115 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 NTF3P20783 257 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 CAMPP49913 170 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 ZFP82Q8N141 532 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 SYT8Q8NBV8 401 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 SPATA25Q9BR10 227 aa6.31□□□□□ -1.4
HLA-B-258ENST00000640615 NOP10Q9NPE3 64 aaKnown RBP6.31□□□□□ -1.4
HLA-B-258ENST00000640615 TRBV24-1A0A075B6N3 115 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 PLAC8L1A1L4L8 177 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 DEFB4AO15263 64 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 ZNF876PQ49A33 203 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 DMRTA1Q5VZB9 504 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 WDR73Q6P4I2 378 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 ATP5L2Q7Z4Y8 100 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.3□□□□□ -1.4
HLA-B-258ENST00000640615 FAM210BQ96KR6 192 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 YPEL4Q96NS1 127 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 MRPL16Q9NX20 251 aaKnown RBP6.3□□□□□ -1.4
HLA-B-258ENST00000640615 MSRB1Q9NZV6 116 aa6.3□□□□□ -1.4
HLA-B-258ENST00000640615 IGHV4-4A0A075B6R2 117 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 TRGV1A0A0A0MS02 117 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 COLCA2A8K830 154 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 S100A8P05109 93 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 RAB4BP61018 213 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 HBBP68871 147 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 COL7A1Q02388 2944 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 DAZ2Q13117 558 aaKnown RBP6.29□□□□□ -1.4
HLA-B-258ENST00000640615 Q8NAQ8 132 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 TM2D3Q9BRN9 247 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 CNFNQ9BYD5 112 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
HLA-B-258ENST00000640615 A0A1B0GW15 77 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 A0A1B0GXF2 115 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 GAGE7O76087 117 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 NXPH4O95158 308 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 TRGC1P0CF51 173 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 GAGE12FP0CL80 117 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 GAGE12GP0CL81 117 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 GAGE12IP0CL82 117 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 LGALS9BQ3B8N2 356 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 RASL11AQ6T310 242 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 Q6ZTI0 123 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 SMIM15Q7Z3B0 74 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 PTH2Q96A98 100 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 B9D2Q9BPU9 175 aa6.28□□□□□ -1.4
HLA-B-258ENST00000640615 KMT2CQ8NEZ4 4911 aaKnown RBP6.27□□□□□ -1.41
HLA-B-258ENST00000640615 SMIM17P0DL12 118 aa6.27□□□□□ -1.41
HLA-B-258ENST00000640615 RAB5AP20339 215 aa6.27□□□□□ -1.41
HLA-B-258ENST00000640615 EVI2AP22794 236 aa6.27□□□□□ -1.41
HLA-B-258ENST00000640615 FAM222AQ5U5X8 452 aa6.27□□□□□ -1.41
HLA-B-258ENST00000640615 C14orf178Q8N769 122 aaPredicted RBP6.27□□□□□ -1.41
HLA-B-258ENST00000640615 RASL10AQ92737 203 aa6.27□□□□□ -1.41
HLA-B-258ENST00000640615 AP1S3Q96PC3 154 aa6.27□□□□□ -1.41
HLA-B-258ENST00000640615 JPT2Q9H910 190 aa6.27□□□□□ -1.41
HLA-B-258ENST00000640615 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 A0A087WWL8 130 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 LYRM9A8MSI8 78 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 A8MWV9 139 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 SPART-AS1P0CW21 52 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 DEFB130BP0DP73 79 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 DEFB130AP0DP74 79 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 RPS10P46783 165 aaKnown RBP6.26□□□□□ -1.41
HLA-B-258ENST00000640615 COX19Q49B96 90 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 PIK3CD-AS1Q5SR53 167 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 FAM74A4Q5TZK3 123 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 TMEM136Q6ZRR5 245 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 FRZBQ92765 325 aa6.26□□□□□ -1.41
HLA-B-258ENST00000640615 GNB1LQ9BYB4 327 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms