RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 PPBPP02775 128 aa10.6□□□□□ -0.71
GFAP-237ENST00000640552 PRM2P04554 102 aa10.6□□□□□ -0.71
GFAP-237ENST00000640552 SLURP1P55000 103 aa10.6□□□□□ -0.71
GFAP-237ENST00000640552 MS4A6AQ9H2W1 248 aa10.6□□□□□ -0.71
GFAP-237ENST00000640552 RBAKDNA6NC62 111 aa10.6□□□□□ -0.71
GFAP-237ENST00000640552 SNRPD3P62318 126 aaKnown RBP10.6□□□□□ -0.71
GFAP-237ENST00000640552 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
GFAP-237ENST00000640552 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
GFAP-237ENST00000640552 NXT2Q9NPJ8 142 aaKnown RBP10.59□□□□□ -0.71
GFAP-237ENST00000640552 U3KQE9 123 aa10.59□□□□□ -0.71
GFAP-237ENST00000640552 TMEM8BA6NDV4 472 aa10.59□□□□□ -0.71
GFAP-237ENST00000640552 DSCR9P59020 149 aa10.59□□□□□ -0.71
GFAP-237ENST00000640552 ZNF124Q15973 351 aa10.59□□□□□ -0.71
GFAP-237ENST00000640552 GCN1Q92616 2671 aaKnown RBP10.58□□□□□ -0.72
GFAP-237ENST00000640552 KNCNA6PVL3 124 aa10.58□□□□□ -0.72
GFAP-237ENST00000640552 HOXD3P31249 432 aaPredicted RBP10.58□□□□□ -0.72
GFAP-237ENST00000640552 ZNF56Q15929 161 aa10.58□□□□□ -0.72
GFAP-237ENST00000640552 GCSHP23434 173 aa10.58□□□□□ -0.72
GFAP-237ENST00000640552 SCGB2A2Q13296 93 aa10.58□□□□□ -0.72
GFAP-237ENST00000640552 ZC2HC1BQ5TFG8 222 aa10.58□□□□□ -0.72
GFAP-237ENST00000640552 MRPS16Q9Y3D3 137 aaKnown RBP10.57□□□□□ -0.72
GFAP-237ENST00000640552 LAGE3Q14657 143 aa10.57□□□□□ -0.72
GFAP-237ENST00000640552 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
GFAP-237ENST00000640552 OR4C5Q8NGB2 326 aa10.57□□□□□ -0.72
GFAP-237ENST00000640552 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
GFAP-237ENST00000640552 VPREB3Q9UKI3 123 aa10.57□□□□□ -0.72
GFAP-237ENST00000640552 TCTEX1D4Q5JR98 221 aa10.57□□□□□ -0.72
GFAP-237ENST00000640552 UBR5O95071 2799 aaPredicted RBP10.56□□□□□ -0.72
GFAP-237ENST00000640552 CRXO43186 299 aaPredicted RBP10.56□□□□□ -0.72
GFAP-237ENST00000640552 SRSF1Q07955 248 aaKnown RBP eCLIP10.56□□□□□ -0.72
GFAP-237ENST00000640552 DYNLRB2Q8TF09 96 aa10.56□□□□□ -0.72
GFAP-237ENST00000640552 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
GFAP-237ENST00000640552 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
GFAP-237ENST00000640552 GATA3P23771 443 aa10.56□□□□□ -0.72
GFAP-237ENST00000640552 DEFB131AP59861 70 aa10.56□□□□□ -0.72
GFAP-237ENST00000640552 C12orf54Q6X4T0 127 aa10.56□□□□□ -0.72
GFAP-237ENST00000640552 OR11H1Q8NG94 326 aa10.56□□□□□ -0.72
GFAP-237ENST00000640552 CD5LO43866 347 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 IGLV1-40P01703 118 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 WFDC11Q8NEX6 87 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 CSTL1Q9H114 145 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 MDFICQ9P1T7 246 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 IGHV4-31P0DP07 118 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 PSMB8P28062 276 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 DPH3P1Q9H4G8 78 aa10.55□□□□□ -0.72
GFAP-237ENST00000640552 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 UNC79Q9P2D8 2635 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 RNF151Q2KHN1 245 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 DEFB113Q30KQ7 82 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 Q8N8P6 123 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 KLHL30-AS1Q8NEE0 82 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 MUC4Q99102 2169 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
GFAP-237ENST00000640552 K7EP13 123 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 SUMO2P61956 95 aaKnown RBP10.54□□□□□ -0.72
GFAP-237ENST00000640552 BVES-AS1Q5T3Y7 98 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 U3KQK5 164 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 IGKCP01834 107 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 COX8AP10176 69 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 ARL6IP6Q8N6S5 226 aa10.54□□□□□ -0.72
GFAP-237ENST00000640552 MRPL53Q96EL3 112 aaKnown RBP10.54□□□□□ -0.72
GFAP-237ENST00000640552 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
GFAP-237ENST00000640552 TMEM97Q5BJF2 176 aa10.53□□□□□ -0.72
GFAP-237ENST00000640552 H3BUA1 57 aa10.52□□□□□ -0.72
GFAP-237ENST00000640552 APRG1Q8IVJ8 170 aa10.52□□□□□ -0.72
GFAP-237ENST00000640552 JMJD8Q96S16 334 aa10.52□□□□□ -0.72
GFAP-237ENST00000640552 COX11Q9Y6N1 276 aa10.52□□□□□ -0.72
GFAP-237ENST00000640552 SETXQ7Z333 2677 aaKnown RBP10.52□□□□□ -0.72
GFAP-237ENST00000640552 IGKV2D-26A0A0A0MRZ7 120 aa10.52□□□□□ -0.73
GFAP-237ENST00000640552 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
GFAP-237ENST00000640552 LGALS9CQ6DKI2 356 aa10.52□□□□□ -0.73
GFAP-237ENST00000640552 GATD1Q8NB37 220 aa10.52□□□□□ -0.73
GFAP-237ENST00000640552 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.73
GFAP-237ENST00000640552 NBPF19A0A087WUL8 3843 aa10.52□□□□□ -0.73
GFAP-237ENST00000640552 DPM2O94777 84 aa10.51□□□□□ -0.73
GFAP-237ENST00000640552 COX8CQ7Z4L0 72 aa10.51□□□□□ -0.73
GFAP-237ENST00000640552 SOCS3O14543 225 aa10.51□□□□□ -0.73
GFAP-237ENST00000640552 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
GFAP-237ENST00000640552 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
GFAP-237ENST00000640552 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
GFAP-237ENST00000640552 H3BUT2 72 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 CCL25O15444 150 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 ATP5LO75964 103 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 Q8N1Y9 231 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 NRACQ8N912 160 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 RASL10AQ92737 203 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 CD300EQ496F6 205 aaPredicted RBP10.5□□□□□ -0.73
GFAP-237ENST00000640552 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 LGALS1P09382 135 aaKnown RBP10.5□□□□□ -0.73
GFAP-237ENST00000640552 RPL39P62891 51 aaKnown RBP10.5□□□□□ -0.73
GFAP-237ENST00000640552 ODF1Q14990 250 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 YAE1D1Q9NRH1 226 aa10.5□□□□□ -0.73
GFAP-237ENST00000640552 SFTA2Q6UW10 78 aa10.49□□□□□ -0.73
GFAP-237ENST00000640552 UBE2E2Q96LR5 201 aa10.49□□□□□ -0.73
GFAP-237ENST00000640552 CNFNQ9BYD5 112 aa10.49□□□□□ -0.73
GFAP-237ENST00000640552 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
GFAP-237ENST00000640552 CDKN1BP46527 198 aa10.49□□□□□ -0.73
GFAP-237ENST00000640552 PCP4P48539 62 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms