RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 IGHV3OR16-10A0A075B7F0 116 aa15.2■□□□□ 0.02
SYNGAP1-227ENST00000638142 MGPP08493 103 aa15.2■□□□□ 0.02
SYNGAP1-227ENST00000638142 AZU1P20160 251 aa15.2■□□□□ 0.02
SYNGAP1-227ENST00000638142 RNASE4P34096 147 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-227ENST00000638142 BAALCQ8WXS3 180 aa15.2■□□□□ 0.02
SYNGAP1-227ENST00000638142 SPTBN1Q01082 2364 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-227ENST00000638142 H3BMG7 143 aa15.19■□□□□ 0.02
SYNGAP1-227ENST00000638142 SPRY2O43597 315 aa15.19■□□□□ 0.02
SYNGAP1-227ENST00000638142 TSSC4Q9Y5U2 329 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-227ENST00000638142 ATRXP46100 2492 aa15.19■□□□□ 0.02
SYNGAP1-227ENST00000638142 GAGE12HA6NDE8 117 aa15.18■□□□□ 0.02
SYNGAP1-227ENST00000638142 DEFB1P60022 68 aa15.18■□□□□ 0.02
SYNGAP1-227ENST00000638142 POM121L12Q8N7R1 296 aa15.18■□□□□ 0.02
SYNGAP1-227ENST00000638142 IGF2RP11717 2491 aa15.18■□□□□ 0.02
SYNGAP1-227ENST00000638142 SVEP1Q4LDE5 3571 aa15.18■□□□□ 0.02
SYNGAP1-227ENST00000638142 RNASE3P12724 160 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-227ENST00000638142 GTSF1LQ9H1H1 148 aa15.18■□□□□ 0.02
SYNGAP1-227ENST00000638142 NXPH4O95158 308 aa15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 RPL11P62913 178 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 GAGE13Q4V321 117 aa15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 BRD3OSQ6XYD6 125 aa15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 SPATA25Q9BR10 227 aa15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 PRO0461Q9UI25 63 aa15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 ASH1LQ9NR48 2969 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 IGHG2P01859 326 aa15.17■□□□□ 0.02
SYNGAP1-227ENST00000638142 PRSS29PA6NIE9 313 aa15.16■□□□□ 0.02
SYNGAP1-227ENST00000638142 GNRH2O43555 120 aa15.16■□□□□ 0.02
SYNGAP1-227ENST00000638142 F6UB75 175 aa15.16■□□□□ 0.02
SYNGAP1-227ENST00000638142 IGHV4-39P01824 125 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 LGALS1P09382 135 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 RPL32P62910 135 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 ETDBQ3ZM63 59 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 SPAG8Q99932 426 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 PRADC1Q9BSG0 188 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 LINC01549A6NIU2 74 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 IGHV3-11P01762 117 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 AMTNQ6UX39 209 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 SH2D6Q7Z4S9 175 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 RHPN1-AS1Q9BWJ2 59 aa15.15■□□□□ 0.02
SYNGAP1-227ENST00000638142 COL6A6A6NMZ7 2263 aa15.14■□□□□ 0.01
SYNGAP1-227ENST00000638142 HIVEP3Q5T1R4 2406 aa15.14■□□□□ 0.01
SYNGAP1-227ENST00000638142 IGHV4OR15-8A0A075B7B6 117 aa15.14■□□□□ 0.01
SYNGAP1-227ENST00000638142 A0A087WW49 117 aa15.14■□□□□ 0.01
SYNGAP1-227ENST00000638142 KIF25-AS1Q9Y6Z4 181 aa15.14■□□□□ 0.01
SYNGAP1-227ENST00000638142 SMAGPQ0VAQ4 97 aa15.13■□□□□ 0.01
SYNGAP1-227ENST00000638142 CYSLTR1Q9Y271 337 aa15.13■□□□□ 0.01
SYNGAP1-227ENST00000638142 PF4V1P10720 104 aa15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 SCGB2A2Q13296 93 aa15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 DAZ1Q9NQZ3 744 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 KLLNB2CW77 178 aa15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 LINC00315P59091 139 aa15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 LY6EQ16553 131 aa15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 MORN3Q6PF18 240 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 ACACBO00763 2458 aa15.12■□□□□ 0.01
SYNGAP1-227ENST00000638142 HOXA3O43365 443 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-227ENST00000638142 IGKV3-7A0A075B6H7 116 aa15.11■□□□□ 0.01
SYNGAP1-227ENST00000638142 A6NDX4 124 aa15.11■□□□□ 0.01
SYNGAP1-227ENST00000638142 ZNF815PA8K554 130 aa15.11■□□□□ 0.01
SYNGAP1-227ENST00000638142 PAPPA-AS1Q5QFB9 102 aa15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 TMEM238LA0A1B0GVL6 79 aa15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 A6NJY4 79 aa15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 H3BUX3 64 aa15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 DUSP14O95147 198 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 COX6B1P14854 86 aa15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 PIMREGQ9BSJ6 248 aa15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 ABCA2Q9BZC7 2435 aa15.1■□□□□ 0.01
SYNGAP1-227ENST00000638142 C19orf84I3L1E1 186 aa15.09■□□□□ 0.01
SYNGAP1-227ENST00000638142 IGHV4-38-2P0DP08 117 aa15.09■□□□□ 0.01
SYNGAP1-227ENST00000638142 FAM159AQ6UWV7 190 aa15.09■□□□□ 0.01
SYNGAP1-227ENST00000638142 IGHV4-61A0A0C4DH41 118 aa15.09■□□□□ 0.01
SYNGAP1-227ENST00000638142 IGLV1-40P01703 118 aa15.09■□□□□ 0.01
SYNGAP1-227ENST00000638142 CRYGDP07320 174 aa15.09■□□□□ 0.01
SYNGAP1-227ENST00000638142 POLR2KP53803 58 aaKnown RBP15.08■□□□□ 0.01
SYNGAP1-227ENST00000638142 SCGB1D4Q6XE38 83 aa15.08■□□□□ 0.01
SYNGAP1-227ENST00000638142 ID1P41134 155 aa15.08■□□□□ 0
SYNGAP1-227ENST00000638142 TP53TG1Q9Y2A0 90 aa15.08■□□□□ 0
SYNGAP1-227ENST00000638142 AKAP6Q13023 2319 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 IGIPA6NJ69 53 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 ZFP2Q6ZN57 461 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 PGPEP1Q9NXJ5 209 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 MUC4Q99102 2169 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 K7EMT4 169 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 NDUFS8O00217 210 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 TSHBP01222 138 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 HERVK_113P61574 105 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 TMEM141Q96I45 108 aa15.07■□□□□ 0
SYNGAP1-227ENST00000638142 IGLV4-69A0A075B6H9 119 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 VCYO14598 125 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 BLCAPP62952 87 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 SUMO4Q6EEV6 95 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 MTURNQ8N3F0 131 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 KIR2DL4Q99706 377 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 C11orf86A6NJI1 115 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 UBE2D1P51668 147 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 PMVKQ15126 192 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 ATP6V0E2Q8NHE4 81 aa15.06■□□□□ 0
SYNGAP1-227ENST00000638142 EPG5Q9HCE0 2579 aa15.05■□□□□ 0
SYNGAP1-227ENST00000638142 LY6DQ14210 128 aa15.05■□□□□ 0
SYNGAP1-227ENST00000638142 LCNL1Q6ZST4 164 aa15.05■□□□□ 0
SYNGAP1-227ENST00000638142 PLEKHB2Q96CS7 222 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms