RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 LOC400499M0QZD8 3231 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 RIF1Q5UIP0 2472 aaKnown RBP1.6□□□□□ -2.15
CLN5-212ENST00000636602 CACNA1AO00555 2505 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 PIEZO1Q92508 2521 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 EXPH5Q8NEV8 1989 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 SPTBN4Q9H254 2564 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 CEP250Q9BV73 2442 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 GNG14A0A1W2PPG7 69 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 EDF1O60869 148 aaKnown RBP1.59□□□□□ -2.15
CLN5-212ENST00000636602 HYPMO75409 117 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 KLF7O75840 302 aaPredicted RBP1.59□□□□□ -2.15
CLN5-212ENST00000636602 DHFRP00374 187 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 IFNA21P01568 189 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 IFI6P09912 130 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 RPL38P63173 70 aaKnown RBP1.59□□□□□ -2.15
CLN5-212ENST00000636602 EMX2Q04743 252 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 MSMO1Q15800 293 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 ZCCHC23Q6ZST2 131 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 RPS27LQ71UM5 84 aaKnown RBP1.59□□□□□ -2.15
CLN5-212ENST00000636602 COMMD6Q7Z4G1 85 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.59□□□□□ -2.15
CLN5-212ENST00000636602 PLPP5Q8NEB5 264 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 TMEM254Q8TBM7 123 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 LRTM1Q9HBL6 345 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 LAMTOR3Q9UHA4 124 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 OR52A1Q9UKL2 312 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 DNAJC15Q9Y5T4 150 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 SOX21Q9Y651 276 aaPredicted RBP1.59□□□□□ -2.15
CLN5-212ENST00000636602 SNURFQ9Y675 71 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 LY96Q9Y6Y9 160 aa1.59□□□□□ -2.15
CLN5-212ENST00000636602 DMXL2Q8TDJ6 3036 aa1.59□□□□□ -2.16
CLN5-212ENST00000636602 TNRC6AQ8NDV7 1962 aaKnown RBP1.59□□□□□ -2.16
CLN5-212ENST00000636602 SPTBP11277 2137 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 ALPK2Q86TB3 2170 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 IGKV2-40A0A087WW87 121 aaPredicted RBP1.58□□□□□ -2.16
CLN5-212ENST00000636602 TRBV6-8A0A0A6YYG3 113 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 PFDN1O60925 122 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 IGKV2D-40P01614 121 aaPredicted RBP1.58□□□□□ -2.16
CLN5-212ENST00000636602 PRB1P04280 392 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 LINC00032P0C843 101 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 ZNF93P35789 620 aaPredicted RBP1.58□□□□□ -2.16
CLN5-212ENST00000636602 PSPHP78330 225 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 RTL8BQ17RB0 113 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 C1orf137Q5JT78 98 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 TMEM78Q5T7P6 136 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 SLC48A1Q6P1K1 146 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 MORN4Q8NDC4 146 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 RETNLBQ9BQ08 111 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 RTL8AQ9BWD3 113 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 DPY30Q9C005 99 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 TAS2R7Q9NYW3 318 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 SMPXQ9UHP9 88 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 ASB4Q9Y574 426 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 ATMQ13315 3056 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 CNOT1A5YKK6 2376 aaKnown RBP1.58□□□□□ -2.16
CLN5-212ENST00000636602 NBEAQ8NFP9 2946 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
CLN5-212ENST00000636602 EML6Q6ZMW3 1958 aa1.58□□□□□ -2.16
CLN5-212ENST00000636602 PTPRZ1P23471 2315 aaPredicted RBP1.57□□□□□ -2.16
CLN5-212ENST00000636602 SMG1Q96Q15 3661 aaKnown RBP1.57□□□□□ -2.16
CLN5-212ENST00000636602 ITPR1Q14643 2758 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 KNTC1P50748 2209 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 IGKV3-7A0A075B6H7 116 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 A0A0G2JND7 137 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 TCRBV4S1A1TA0A5B7 111 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 CCDC160A6NGH7 325 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 BBIP1A8MTZ0 92 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 H0YJX3 145 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 K7ERJ3 54 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 FAM107AO95990 144 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 STATHP02808 62 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 S100A3P33764 101 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 GNGT1P63211 74 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 BTG2P78543 158 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 C1orf140Q5VVS0 124 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 SCIMPQ6UWF3 145 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 TEX261Q6UWH6 196 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 C10orf82Q8WW14 230 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 TSLPQ969D9 159 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 CCDC115Q96NT0 180 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 CACYBPQ9HB71 228 aaKnown RBP1.57□□□□□ -2.16
CLN5-212ENST00000636602 CCDC167Q9P0B6 97 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 NDUFAF1Q9Y375 327 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 U3KQ87 197 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 ZZEF1O43149 2961 aa1.57□□□□□ -2.16
CLN5-212ENST00000636602 CEP295Q9C0D2 2601 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 BOD1L1Q8NFC6 3051 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 KMT2BQ9UMN6 2715 aaPredicted RBP1.56□□□□□ -2.16
CLN5-212ENST00000636602 KIAA1549Q9HCM3 1950 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 DSPP15924 2871 aaKnown RBP1.56□□□□□ -2.16
CLN5-212ENST00000636602 A0A096LPI6 279 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 TRAV17A0A0B4J275 112 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 HMGN2P05204 90 aaKnown RBP1.56□□□□□ -2.16
CLN5-212ENST00000636602 OR10J4P0C629 311 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 POLR2JP52435 117 aaKnown RBP1.56□□□□□ -2.16
CLN5-212ENST00000636602 ROMO1P60602 79 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 PLCXD2Q0VAA5 305 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 DEFB109BQ30KR1 87 aa1.56□□□□□ -2.16
CLN5-212ENST00000636602 PATE2Q6UY27 113 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms