RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 RPS10P46783 165 aaKnown RBP5.31□□□□□ -1.56
CIITA-214ENST00000636238 Q6ZR54 194 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 PGLYRP4Q96LB8 373 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 IMMP2LQ96T52 175 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 PYGO2Q9BRQ0 406 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 LENEPQ9Y5L5 61 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 APOBP04114 4563 aaKnown RBP5.31□□□□□ -1.56
CIITA-214ENST00000636238 TRBV24-1A0A075B6N3 115 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 TRAV12-2A0A075B6T6 113 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 TRAV12-3A0A0B4J271 114 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 TEX48A0A1B0GUV7 120 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 A8MWL6 223 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 H3BMM0 161 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 HLA-DRB4P13762 266 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 CRISP2P16562 243 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 LEPP41159 167 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 SSTP61278 116 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 SPINK13Q1W4C9 94 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 MUC21Q5SSG8 566 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 MRPL54Q6P161 138 aaKnown RBP5.3□□□□□ -1.56
CIITA-214ENST00000636238 AMTNQ6UX39 209 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 Q8N1X5 172 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 NUP35Q8NFH5 326 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 TSKUQ8WUA8 353 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 GTSF1Q8WW33 167 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 NEU1Q99519 415 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 TPPP3Q9BW30 176 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 NAGKQ9UJ70 344 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 HLA-DRB4X5D2U9 266 aa5.3□□□□□ -1.56
CIITA-214ENST00000636238 DEFB131BA0A096LNP1 70 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 IGKV3D-20A0A0C4DH25 116 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 IGHV4-28A0A0C4DH34 117 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 MUC21A0A0G2JKD1 596 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 MUC21A0A140T8X8 626 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 CT83Q5H943 113 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 GFI1BQ5VTD9 330 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 Q6ZTC4 211 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 ZFP82Q8N141 532 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 MAPKAPK5-AS1Q8N8E1 139 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 BTF3L4Q96K17 158 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 ODF3Q96PU9 254 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 NAT8BQ9UHF3 227 aa5.29□□□□□ -1.56
CIITA-214ENST00000636238 TRAV9-1A0A075B6T8 112 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 TRAV21A0A0B4J279 112 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 TRBV7-9A0A0J9YWB2 115 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 C7orf71A4D174 169 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 A8MTW9 85 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 KLLNB2CW77 178 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 GNRH2O43555 120 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 RBMY1A1P0DJD3 496 aaKnown RBP5.28□□□□□ -1.56
CIITA-214ENST00000636238 RBMY1CP0DJD4 496 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 TSPOP30536 169 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 RPS20P60866 119 aaKnown RBP5.28□□□□□ -1.56
CIITA-214ENST00000636238 RBMY1FQ15415 496 aaKnown RBP5.28□□□□□ -1.56
CIITA-214ENST00000636238 ANXA2RQ3ZCQ2 193 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 LINC01559Q495D7 138 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 C1orf134Q5TEV5 83 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 LYZL1Q6UWQ5 148 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 STHQ8IWL8 128 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 C1QTNF4Q9BXJ3 329 aa5.28□□□□□ -1.56
CIITA-214ENST00000636238 TIMM8BQ9Y5J9 83 aaPredicted RBP5.28□□□□□ -1.56
CIITA-214ENST00000636238 XKRY2A2RUG3 117 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 C16orf90A8MZG2 172 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 C1orf196B1AJZ1 125 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 DEFB4AO15263 64 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 ZNF324O75467 553 aaPredicted RBP5.27□□□□□ -1.57
CIITA-214ENST00000636238 TRGC2P03986 189 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 TYMSP04818 313 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 ARMS2P0C7Q2 107 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 CDKN1BP46527 198 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 CAMPP49913 170 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 RAB4BP61018 213 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 FABP9Q0Z7S8 132 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 DMRTA1Q5VZB9 504 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 Q6AWC8 147 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
CIITA-214ENST00000636238 FER1L6-AS1Q8NA97 138 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 GFRA4Q9GZZ7 299 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 X6R8D5 127 aa5.27□□□□□ -1.57
CIITA-214ENST00000636238 FAM231BA6NCW3 169 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 SNURFLB1AK76 121 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 H3BVH4 76 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 CRXO43186 299 aaPredicted RBP5.26□□□□□ -1.57
CIITA-214ENST00000636238 PRM2P04554 102 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
CIITA-214ENST00000636238 IGLC6P0CF74 106 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 FOXA3P55318 350 aaPredicted RBP5.26□□□□□ -1.57
CIITA-214ENST00000636238 NUTF2P61970 127 aaKnown RBP5.26□□□□□ -1.57
CIITA-214ENST00000636238 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 TMEM136Q6ZRR5 245 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 UBE2DNLQ8IWF7 75 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 FRZBQ92765 325 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 SSBP4Q9BWG4 385 aaPredicted RBP5.26□□□□□ -1.57
CIITA-214ENST00000636238 MRPL18Q9H0U6 180 aaKnown RBP5.26□□□□□ -1.57
CIITA-214ENST00000636238 XCL2Q9UBD3 114 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 TP53TG3Q9ULZ0 132 aa5.26□□□□□ -1.57
CIITA-214ENST00000636238 TRAPPC1Q9Y5R8 145 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms