RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 TTC9CQ8N5M4 171 aa11.79□□□□□ -0.52
CLN8-209ENST00000635970 IGF1P05019 195 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 ODF1Q14990 250 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 ZNF562Q6V9R5 426 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 PCP2Q8IVA1 136 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 FANCD2OSQ96PS1 177 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 ASCL2Q99929 193 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 HHLA3Q9XRX5 114 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 RBAKDNA6NC62 111 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 PRSS47A8MTI9 375 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 IGKCP01834 107 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 ARPC1AQ92747 370 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 TM2D2Q9BX73 214 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
CLN8-209ENST00000635970 IGKV2-40A0A087WW87 121 aaPredicted RBP11.77□□□□□ -0.53
CLN8-209ENST00000635970 IGKV2D-40P01614 121 aaPredicted RBP11.77□□□□□ -0.53
CLN8-209ENST00000635970 CFHR3Q02985 330 aa11.77□□□□□ -0.53
CLN8-209ENST00000635970 TAL2Q16559 108 aa11.77□□□□□ -0.53
CLN8-209ENST00000635970 LCNL1Q6ZST4 164 aa11.77□□□□□ -0.53
CLN8-209ENST00000635970 TMEM238C9JI98 176 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 DPM2O94777 84 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 LEPP41159 167 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 RAB37Q96AX2 223 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 CITED2Q99967 270 aaPredicted RBP11.76□□□□□ -0.53
CLN8-209ENST00000635970 TRAV41A0A0B4J266 112 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 PRSS1P07477 247 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 Q8N8P6 123 aa11.76□□□□□ -0.53
CLN8-209ENST00000635970 VWFP04275 2813 aa11.75□□□□□ -0.53
CLN8-209ENST00000635970 F8W735 103 aaPredicted RBP11.75□□□□□ -0.53
CLN8-209ENST00000635970 PPIFP30405 207 aaKnown RBP11.75□□□□□ -0.53
CLN8-209ENST00000635970 C19orf54Q5BKX5 351 aa11.75□□□□□ -0.53
CLN8-209ENST00000635970 CHAC1Q9BUX1 264 aa11.75□□□□□ -0.53
CLN8-209ENST00000635970 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
CLN8-209ENST00000635970 SMKR1H3BMG3 65 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 ORM1P02763 201 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 ZNF80P51504 273 aaPredicted RBP11.74□□□□□ -0.53
CLN8-209ENST00000635970 CRIP2P52943 208 aaPredicted RBP11.74□□□□□ -0.53
CLN8-209ENST00000635970 KHDC1LQ5JSQ8 128 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 ZNF580Q9UK33 172 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 A0A1W2PRX2 142 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 SCGB1A1P11684 91 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 GCSHP23434 173 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 VGLL1Q99990 258 aa11.74□□□□□ -0.53
CLN8-209ENST00000635970 F8W1H4 67 aa11.73□□□□□ -0.53
CLN8-209ENST00000635970 FXYD7P58549 80 aa11.73□□□□□ -0.53
CLN8-209ENST00000635970 NSUN5P1Q3KNT7 163 aa11.73□□□□□ -0.53
CLN8-209ENST00000635970 CEND1Q8N111 149 aa11.73□□□□□ -0.53
CLN8-209ENST00000635970 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 J3QR89 54 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 IGHG4P01861 327 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 MYOZ3Q8TDC0 251 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 C18orf15Q96N68 181 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 KLK15Q9H2R5 256 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 SMAD5-AS1Q9Y6J3 95 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
CLN8-209ENST00000635970 PSMB8P28062 276 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 C18orf65Q6ZTR6 163 aa11.72□□□□□ -0.53
CLN8-209ENST00000635970 PHLDA1Q8WV24 401 aaPredicted RBP11.72□□□□□ -0.53
CLN8-209ENST00000635970 PKD1L1Q8TDX9 2849 aa11.71□□□□□ -0.53
CLN8-209ENST00000635970 IGLV2-18A0A075B6J9 118 aa11.71□□□□□ -0.53
CLN8-209ENST00000635970 LINC01619G3V211 115 aa11.71□□□□□ -0.53
CLN8-209ENST00000635970 IGLV1-40P01703 118 aa11.71□□□□□ -0.53
CLN8-209ENST00000635970 CTSGP08311 255 aa11.71□□□□□ -0.53
CLN8-209ENST00000635970 FXYD2P54710 66 aa11.71□□□□□ -0.53
CLN8-209ENST00000635970 IGKV2D-26A0A0A0MRZ7 120 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 PF4V1P10720 104 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 KLK9Q2XQG4 91 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 Q8TAT8 98 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
CLN8-209ENST00000635970 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 CHTOPQ9Y3Y2 248 aaKnown RBP11.7□□□□□ -0.54
CLN8-209ENST00000635970 E9PLD3 99 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 CIDEAO60543 219 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 PLNP26678 52 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 LAGE3Q14657 143 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 ZC2HC1BQ5TFG8 222 aa11.7□□□□□ -0.54
CLN8-209ENST00000635970 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
CLN8-209ENST00000635970 TSSC4Q9Y5U2 329 aaPredicted RBP11.7□□□□□ -0.54
CLN8-209ENST00000635970 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
CLN8-209ENST00000635970 ELANEP08246 267 aa11.69□□□□□ -0.54
CLN8-209ENST00000635970 FOXI2Q6ZQN5 318 aa11.69□□□□□ -0.54
CLN8-209ENST00000635970 NDUFA11Q86Y39 141 aa11.69□□□□□ -0.54
CLN8-209ENST00000635970 RNF152Q8N8N0 203 aa11.69□□□□□ -0.54
CLN8-209ENST00000635970 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
CLN8-209ENST00000635970 TCTAP57738 103 aa11.68□□□□□ -0.54
CLN8-209ENST00000635970 WFDC3Q8IUB2 231 aa11.68□□□□□ -0.54
CLN8-209ENST00000635970 S4R3C0 116 aa11.68□□□□□ -0.54
CLN8-209ENST00000635970 A0A087WX48 190 aa11.68□□□□□ -0.54
CLN8-209ENST00000635970 TRAV12-1A0A0B4J245 112 aa11.67□□□□□ -0.54
CLN8-209ENST00000635970 K7EMI3 77 aa11.67□□□□□ -0.54
CLN8-209ENST00000635970 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
CLN8-209ENST00000635970 GTSCR1Q86UQ5 136 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms