RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 KIAA1549LQ6ZVL6 1849 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 IGKV1D-17A0A075B6S4 117 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 TRAV17A0A0B4J275 112 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 IGHV1-3A0A0C4DH29 117 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 IGHV1-24A0A0C4DH33 117 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 MDFIC2A0A1B0GVS7 189 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 A6NDX4 124 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 CCL16O15467 120 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 LYRM1O43325 122 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 GNRH2O43555 120 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 LY6HO94772 140 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 CPSF4O95639 269 aaKnown RBP1.94□□□□□ -2.1
PSPC1-208ENST00000635562 INSP01308 110 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 IGLV1-51P01701 117 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 MSMBP08118 114 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 SFTA3P0C7M3 94 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 PIPP12273 146 aaPredicted RBP1.94□□□□□ -2.1
PSPC1-208ENST00000635562 KRTDAPP60985 99 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 SUPT4H1P63272 117 aaKnown RBP1.94□□□□□ -2.1
PSPC1-208ENST00000635562 ELOBQ15370 118 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 SDIM1Q6ZPB5 146 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 HMGN2P46Q86SG4 172 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 Q8N976 141 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 Q8N9W7 124 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 KLHL30-AS1Q8NEE0 82 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 TRGV9Q99603 122 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 RETNLBQ9BQ08 111 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 MRPL35Q9NZE8 188 aaKnown RBP1.94□□□□□ -2.1
PSPC1-208ENST00000635562 LAMB2P55268 1798 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 KIAA0556O60303 1618 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 RALGAPBQ86X10 1494 aa1.94□□□□□ -2.1
PSPC1-208ENST00000635562 COL4A6Q14031 1691 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 SCN3AQ9NY46 2000 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 EDC4Q6P2E9 1401 aaKnown RBP1.93□□□□□ -2.1
PSPC1-208ENST00000635562 MEGF6O75095 1541 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 LTBP4Q8N2S1 1624 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 IGHV3-15A0A0B4J1V0 119 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 A0A1W2PQD3 144 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 KANTRA0A1W2PQU2 76 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 A6NED7 52 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 H3BMM0 161 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 TRGV3P03979 118 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 PIRTP0C851 137 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 MPV17P39210 176 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 RHOHQ15669 191 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 UBE2SQ16763 222 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 CEND1Q8N111 149 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 LINC00612Q8N6U2 182 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 Q8N814 137 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 OR8B3Q8NGG8 313 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 Q96M85 177 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 ODF3Q96PU9 254 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 OR8B2Q96RD0 313 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 SLC50A1Q9BRV3 221 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 CYSTM1Q9H1C7 97 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 NHP2Q9NX24 153 aaKnown RBP1.93□□□□□ -2.1
PSPC1-208ENST00000635562 CRYBG1Q9Y4K1 1723 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 TSC2P49815 1807 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 MAST1Q9Y2H9 1570 aa1.93□□□□□ -2.1
PSPC1-208ENST00000635562 ZNF142P52746 1687 aaPredicted RBP1.93□□□□□ -2.1
PSPC1-208ENST00000635562 ASXL1Q8IXJ9 1541 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 LAMA4Q16363 1823 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 TRAV2A0A0B4J234 112 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 A0A1W2PNU3 283 aaPredicted RBP1.92□□□□□ -2.1
PSPC1-208ENST00000635562 hDV103S1A0JD37 113 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 TMEM223A0PJW6 202 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 NAP1L6A6NFF2 107 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 C17orf112F2Z3M2 114 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 NDUFC1O43677 76 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 CLPSP04118 112 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 P0C879 139 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 CD24P25063 80 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 RPL28P46779 137 aaKnown RBP1.92□□□□□ -2.1
PSPC1-208ENST00000635562 XCL1P47992 114 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 RBM3P98179 157 aaKnown RBP1.92□□□□□ -2.1
PSPC1-208ENST00000635562 SYCNQ0VAF6 134 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 IL17AQ16552 155 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 MPV17LQ2QL34 196 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 SPANXN1Q5VSR9 72 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 CFAP126Q5VTH2 177 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 C2orf91Q6ZV80 131 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 Q8IYB0 196 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 FAM19A2Q8N3H0 131 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 MUC7Q8TAX7 377 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 CST11Q9H112 138 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 LINC00474Q9P2X8 69 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 ZNF222Q9UK12 451 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 PTPRMP28827 1452 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 VWDEQ8N2E2 1590 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 ALS2Q96Q42 1657 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 COL27A1Q8IZC6 1860 aaPredicted RBP1.92□□□□□ -2.1
PSPC1-208ENST00000635562 MUC4Q99102 2169 aa1.92□□□□□ -2.1
PSPC1-208ENST00000635562 LTBP1Q14766 1721 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 ADAMTS9Q9P2N4 1935 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 DOCK11Q5JSL3 2073 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 IGKV2D-26A0A0A0MRZ7 120 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 IGHV3-73A0A0B4J1V6 119 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 PIGBOS1A0A0B4J2F0 54 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms