RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 SVBPQ8N300 66 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 RPP25LQ8N5L8 163 aaKnown RBP3.03□□□□□ -1.92
CDRT1-208ENST00000630868 LINC00612Q8N6U2 182 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 ZNF439Q8NDP4 499 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 OR5T1Q8NG75 326 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 OR51H1Q8NH63 302 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 FAM210BQ96KR6 192 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 LINC01587Q99440 93 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 TMEM208Q9BTX3 173 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 SND1-IT1Q9HBX3 110 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 CYTL1Q9NRR1 136 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.92
CDRT1-208ENST00000630868 LYRM2Q9NU23 88 aaPredicted RBP3.03□□□□□ -1.92
CDRT1-208ENST00000630868 OR5AC2Q9NZP5 309 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 GSKIPQ9P0R6 139 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 RBM7Q9Y580 266 aaKnown RBP3.03□□□□□ -1.92
CDRT1-208ENST00000630868 WSB1Q9Y6I7 421 aa3.03□□□□□ -1.92
CDRT1-208ENST00000630868 HERC1Q15751 4861 aa3.03□□□□□ -1.93
CDRT1-208ENST00000630868 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.93
CDRT1-208ENST00000630868 NUPR2A6NF83 97 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 KLLNB2CW77 178 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 UPK2O00526 184 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 MED6O75586 246 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 YIF1AO95070 293 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 NDUFA3O95167 84 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 IGKV1-39P01597 117 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 IGKV1-5P01602 117 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 IGKV1D-39P04432 117 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 SEC11BP0C7V7 166 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 S100A10P60903 97 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 MMDQ15546 238 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 FAM162BQ5T6X4 162 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 LGALS9CQ6DKI2 356 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 FAM231DQ6ZW35 169 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 GPR146Q96CH1 333 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 CIB3Q96Q77 187 aaPredicted RBP3.02□□□□□ -1.93
CDRT1-208ENST00000630868 TCEAL7Q9BRU2 100 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 GINS3Q9BRX5 216 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 ZNF471Q9BX82 626 aaPredicted RBP3.02□□□□□ -1.93
CDRT1-208ENST00000630868 KRTAP1-5Q9BYS1 174 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 OR2D2Q9H210 308 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 IFI27L2Q9H2X8 130 aa3.02□□□□□ -1.93
CDRT1-208ENST00000630868 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.02□□□□□ -1.93
CDRT1-208ENST00000630868 LOC102724200A0A096LPH7 203 aaPredicted RBP3.01□□□□□ -1.93
CDRT1-208ENST00000630868 UMAD1C9J7I0 102 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 SYNGR2O43760 224 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 APCSP02743 223 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 LPAR6P43657 344 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 SULT1A1P50225 295 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 SULT1A2P50226 295 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 SMAGPQ0VAQ4 97 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 LTC4SQ16873 150 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 AKIRIN2Q53H80 203 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 DPPA3Q6W0C5 159 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 STX12Q86Y82 276 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 SLC25A29Q8N8R3 303 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 OR2K2Q8NGT1 345 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 CIRBP-AS1Q8TBR5 109 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 HIST1H2BAQ96A08 127 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 GNPNAT1Q96EK6 184 aaPredicted RBP3.01□□□□□ -1.93
CDRT1-208ENST00000630868 C14orf144Q96I85 54 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 C2orf88Q9BSF0 95 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 PARP11Q9NR21 331 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 UQCC1Q9NVA1 299 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 LSM5Q9Y4Y9 91 aaKnown RBP3.01□□□□□ -1.93
CDRT1-208ENST00000630868 KIF25-AS1Q9Y6Z4 181 aa3.01□□□□□ -1.93
CDRT1-208ENST00000630868 PKD1P98161 4303 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 TRAV8-3A0A0A6YYJ7 113 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 TRAV1-1A0A0B4J248 108 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 A0A1B0GVY2 172 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 A0A1B0GW64 132 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 IGSF23A1L1A6 192 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 IZUMO1RA6ND01 250 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 PGPA6NDG6 321 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 H3BUA1 57 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 BPY2O14599 106 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 CNIH1O95406 144 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 HRASP01112 189 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 IFNA10P01566 189 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 MT-ND4LP03901 98 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 HIST1H1BP16401 226 aaKnown RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 AKR1D1P51857 326 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 AKR1C2P52895 323 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 CMC4P56277 68 aaPredicted RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 SPCS3P61009 180 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 RPL30P62888 115 aaKnown RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 DEFA5Q01523 94 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 TNFRSF9Q07011 255 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 TMEM267Q0VDI3 215 aaPredicted RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 PYY3Q5JQD4 70 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 RPL7L1Q6DKI1 246 aaKnown RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 TMEM14EPQ6UXP3 125 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 ZNF833PQ6ZTB9 187 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 RNASE11Q8TAA1 199 aaKnown RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 SMIM12Q96EX1 92 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 PACRGQ96M98 296 aaPredicted RBP3□□□□□ -1.93
CDRT1-208ENST00000630868 GGACTQ9BVM4 153 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 MAP1LC3AQ9H492 121 aa3□□□□□ -1.93
CDRT1-208ENST00000630868 SMDT1Q9H4I9 107 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms