RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 HRH1P35367 487 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 TGFBR1P36897 503 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 SNCAP37840 140 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 CRYBA4P53673 196 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 DEFA1P59665 94 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 DEFA3P59666 94 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 HIST1H1AQ02539 215 aaPredicted RBP1.84□□□□□ -2.11
CDKL5-208ENST00000624953 DAZ2Q13117 558 aaKnown RBP1.84□□□□□ -2.11
CDKL5-208ENST00000624953 OR2F1Q13607 317 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 ARL6IP1Q15041 203 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 NMSQ5H8A3 153 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 C1orf194Q5T5A4 169 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 SFXN4Q6P4A7 337 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 ZNF493Q6ZR52 646 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 LHFPL1Q86WI0 220 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 TMEM256Q8N2U0 113 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 OR10J6PQ8NGY7 276 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 DEDD2Q8WXF8 326 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 ACY3Q96HD9 319 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 NARS2Q96I59 477 aaKnown RBP1.84□□□□□ -2.11
CDKL5-208ENST00000624953 PGLYRP4Q96LB8 373 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 C20orf144Q9BQM9 153 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 C20orf85Q9H1P6 137 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 TXNL4BQ9NX01 149 aaKnown RBP1.84□□□□□ -2.11
CDKL5-208ENST00000624953 PRO0461Q9UI25 63 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 KLF12Q9Y4X4 402 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 A0A0A6YYH2 397 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 ANKRD20A5PA0PJZ0 165 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 A6NJ64 397 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 CENPXA8MT69 81 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 H3BRN7 92 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 SLC17A3O00476 420 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 GSTZ1O43708 216 aaPredicted RBP1.83□□□□□ -2.12
CDKL5-208ENST00000624953 RLN2P04090 185 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 CRYGDP07320 174 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 RAB4AP20338 218 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 SDC2P34741 201 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 AKR1C2P52895 323 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 AP3S2P59780 193 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 SPCS3P61009 180 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 RPL37AP61513 92 aaKnown RBP1.83□□□□□ -2.12
CDKL5-208ENST00000624953 TSPAN5P62079 268 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 RPL32P62910 135 aaKnown RBP1.83□□□□□ -2.12
CDKL5-208ENST00000624953 MRPS10P82664 201 aaKnown RBP1.83□□□□□ -2.12
CDKL5-208ENST00000624953 OR10J3Q5JRS4 329 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 PRR9Q5T870 116 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 OR8I2Q8N0Y5 310 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 ZNF738Q8NE65 137 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 ZNF431Q8TF32 576 aaPredicted RBP1.83□□□□□ -2.12
CDKL5-208ENST00000624953 C7orf33Q8WU49 177 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 PPP1R14BQ96C90 147 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 YIPF6Q96EC8 236 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 FAM19A4Q96LR4 140 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 SLC25A22Q9H936 323 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 MRPL16Q9NX20 251 aaKnown RBP1.83□□□□□ -2.12
CDKL5-208ENST00000624953 FUT9Q9Y231 359 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 ICOSQ9Y6W8 199 aa1.83□□□□□ -2.12
CDKL5-208ENST00000624953 IGHV1OR15-1A0A075B7D0 117 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 TRGV1A0A0A0MS02 117 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 TRAV12-3A0A0B4J271 114 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 C3orf85A0A1B0GTC6 90 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 H7BYZ3 331 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 H7C1H1 209 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 K7EP13 123 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 EIF3GO75821 320 aaKnown RBP eCLIP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 GABARAPO95166 117 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 CDS2O95674 445 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 FAUP35544 74 aaKnown RBP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 GALR1P47211 349 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 RPL29P47914 159 aaKnown RBP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 INPP1P49441 399 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 SUB1P53999 127 aaKnown RBP eCLIP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 TCL1AP56279 114 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 PIGPP57054 158 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 MXD1Q05195 221 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 REG3AQ06141 175 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 ZNF846Q147U1 533 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 NEDD8Q15843 81 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 RGS21Q2M5E4 152 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 LINC01556Q5JQF7 62 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 PATE2Q6UY27 113 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 Q6ZRU5 148 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 NEGR1Q7Z3B1 354 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 CLVS1Q8IUQ0 354 aaPredicted RBP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 OR5H2Q8NGV7 314 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 BORCS5Q969J3 196 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 LINC01600Q96MT4 127 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 SCGB3A2Q96PL1 93 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 TRGV9Q99603 122 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 CCDC32Q9BV29 185 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 MRPL32Q9BYC8 188 aaKnown RBP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 ZNF331Q9NQX6 463 aaPredicted RBP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 DAZ3Q9NR90 486 aaKnown RBP1.82□□□□□ -2.12
CDKL5-208ENST00000624953 COPZ2Q9P299 210 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 PRO0255Q9UI72 69 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 PRELID1Q9Y255 219 aa1.82□□□□□ -2.12
CDKL5-208ENST00000624953 MUC17Q685J3 4493 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 TRGV2A0A075B6R0 118 aa1.81□□□□□ -2.12
CDKL5-208ENST00000624953 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms