RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TRBV7-7A0A0K0K1E9 115 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 B4DSR2 109 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 UBL3O95164 117 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 CRPP02741 224 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 IL4P05112 153 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 NMBP08949 121 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 PIRTP0C851 137 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 BAALC-AS2P0C853 105 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 SSR2P43308 183 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 INSL4Q14641 139 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 SPANXN5Q5MJ07 72 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 C1orf134Q5TEV5 83 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 Q6ZS52 159 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 SLC25A26Q70HW3 274 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 COMMD6Q7Z4G1 85 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 ARPINQ7Z6K5 226 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 LINC00269Q8N2A0 174 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 FAM19A2Q8N3H0 131 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 MUCL1Q96DR8 90 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 SMIM7Q9BQ49 75 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 PLXNA4Q9HCM2 1894 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 RGPD3A6NKT7 1758 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-229ENST00000621897 DIP2BQ9P265 1576 aa2.02□□□□□ -2.09
BRCA1-229ENST00000621897 PLXNA2O75051 1894 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 CPAMD8Q8IZJ3 1885 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 DIDO1Q9BTC0 2240 aaKnown RBP2.01□□□□□ -2.09
BRCA1-229ENST00000621897 STRCQ7RTU9 1775 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 IGLV10-54A0A075B6I4 117 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 IGHV3-64A0A075B6Q5 118 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 TRAV3A0A0B4J244 114 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 TRAV1-1A0A0B4J248 108 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 IGLC7A0M8Q6 106 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 IBA57-AS1B1ANH7 110 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 E7EUB6 86 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 GNGT2O14610 69 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 SFT2D2O95562 160 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 CYB5AP00167 134 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 SLC25A6P12236 298 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 DEFA4P12838 97 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 ADCYAP1P18509 176 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 POLR2JP52435 117 aaKnown RBP2.01□□□□□ -2.09
BRCA1-229ENST00000621897 DSCR4P56555 118 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-229ENST00000621897 TDRG1Q3Y452 100 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 Q5BKY6 102 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 ALKAL2Q6UX46 152 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 MYOZ3Q8TDC0 251 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 DYNLRB2Q8TF09 96 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 C20orf166-AS1Q96NR2 134 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 PMCHL2Q9BQD1 86 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 SMCO4Q9NRQ5 59 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 RABAC1Q9UI14 185 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 S4R3C0 116 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 ADGRB3O60242 1522 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 DISP1Q96F81 1524 aa2.01□□□□□ -2.09
BRCA1-229ENST00000621897 LAMB1P07942 1786 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 SUPT6HQ7KZ85 1726 aaKnown RBP2□□□□□ -2.09
BRCA1-229ENST00000621897 SHANK3Q9BYB0 1731 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 PEAK1Q9H792 1746 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 PLIN4Q96Q06 1357 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 EML5Q05BV3 1969 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 MAP3K4Q9Y6R4 1608 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 IGKV1D-42A0A075B6H8 117 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 IGHV3OR16-8A0A075B7F1 116 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 ATOX1O00244 68 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 IGKCP01834 107 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 APOC3P02656 99 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 MGST1P10620 155 aaKnown RBP2□□□□□ -2.09
BRCA1-229ENST00000621897 MIFP14174 115 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 Q1T7F1 81 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 CASC2Q6XLA1 102 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 TMEM136Q6ZRR5 245 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 LYPD6Q86Y78 171 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 TSLPQ969D9 159 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 MINOS1-NBL1R4GNA1 71 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 KIAA1549LQ6ZVL6 1849 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 LTN1O94822 1766 aa2□□□□□ -2.09
BRCA1-229ENST00000621897 TNS1Q9HBL0 1735 aaKnown RBP2□□□□□ -2.09
BRCA1-229ENST00000621897 PTPN23Q9H3S7 1636 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 INO80Q9ULG1 1556 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-229ENST00000621897 C5orf67F2Z3F1 127 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 CBLN1P23435 193 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 ZNF345Q14585 488 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 S100A16Q96FQ6 103 aaKnown RBP1.99□□□□□ -2.09
BRCA1-229ENST00000621897 TMEM141Q96I45 108 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 OR8B2Q96RD0 313 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 NDUFA12Q9UI09 145 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 EPRSP07814 1512 aaKnown RBP1.99□□□□□ -2.09
BRCA1-229ENST00000621897 NCOA2Q15596 1464 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 PPRC1Q5VV67 1664 aaKnown RBP1.99□□□□□ -2.09
BRCA1-229ENST00000621897 TMEM131LA2VDJ0 1609 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 KIF14Q15058 1648 aa1.99□□□□□ -2.09
BRCA1-229ENST00000621897 ABCC2Q92887 1545 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 MYH4Q9Y623 1939 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 LOC107984156A0A0G2JMH3 177 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 hADV29S1A0JD25 119 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 PDCD5O14737 125 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 NUPR1O60356 82 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 CCKP06307 115 aa1.98□□□□□ -2.09
BRCA1-229ENST00000621897 KRTDAPP60985 99 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms