RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
TRIM6-212ENST00000621176 HOXA3O43365 443 aaPredicted RBP6.63□□□□□ -1.35
TRIM6-212ENST00000621176 KLHL30-AS1Q8NEE0 82 aa6.63□□□□□ -1.35
TRIM6-212ENST00000621176 LINC00477Q96M19 166 aa6.63□□□□□ -1.35
TRIM6-212ENST00000621176 PGPEP1Q9NXJ5 209 aa6.63□□□□□ -1.35
TRIM6-212ENST00000621176 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 SOCS3O14543 225 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 CRYGDP07320 174 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 RNASE3P12724 160 aaKnown RBP6.62□□□□□ -1.35
TRIM6-212ENST00000621176 RNASE4P34096 147 aaKnown RBP6.62□□□□□ -1.35
TRIM6-212ENST00000621176 ASIPP42127 132 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 SPOCK3Q9BQ16 436 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 HIVEP3Q5T1R4 2406 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 IGKV3-7A0A075B6H7 116 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 IGHV3OR16-10A0A075B7F0 116 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 TRAV41A0A0B4J266 112 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 NPFFO15130 113 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 DUSP14O95147 198 aaKnown RBP6.62□□□□□ -1.35
TRIM6-212ENST00000621176 COX6B1P14854 86 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 ARL3P36405 182 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 EMP1P54849 157 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 LMO4P61968 165 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 OR10J6PQ8NGY7 276 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
TRIM6-212ENST00000621176 J3QR89 54 aa6.61□□□□□ -1.35
TRIM6-212ENST00000621176 SCGB2A2Q13296 93 aa6.61□□□□□ -1.35
TRIM6-212ENST00000621176 C19orf54Q5BKX5 351 aa6.61□□□□□ -1.35
TRIM6-212ENST00000621176 BPESC1Q9GZL8 116 aa6.61□□□□□ -1.35
TRIM6-212ENST00000621176 LINC01549A6NIU2 74 aa6.61□□□□□ -1.35
TRIM6-212ENST00000621176 TSHBP01222 138 aa6.61□□□□□ -1.35
TRIM6-212ENST00000621176 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
TRIM6-212ENST00000621176 MRPL16Q9NX20 251 aaKnown RBP6.61□□□□□ -1.35
TRIM6-212ENST00000621176 SMCPP49901 116 aaPredicted RBP6.6□□□□□ -1.35
TRIM6-212ENST00000621176 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
TRIM6-212ENST00000621176 JPT2Q9H910 190 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 C11orf86A6NJI1 115 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 LINC00315P59091 139 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 ZFP2Q6ZN57 461 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 FAM19A4Q96LR4 140 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 ABCA2Q9BZC7 2435 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 FAM223BA6NKX1 122 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 NDUFS8O00217 210 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 OVOL1O14753 267 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 IGHV3-11P01762 117 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 UBE2D1P51668 147 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRIM6-212ENST00000621176 FAM223AQ8IWN6 122 aa6.6□□□□□ -1.35
TRIM6-212ENST00000621176 CIDEAO60543 219 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 CD7P09564 240 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 SCGB1A1P11684 91 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 RPL39P62891 51 aaKnown RBP6.59□□□□□ -1.35
TRIM6-212ENST00000621176 CFAP126Q5VTH2 177 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 UBTD1Q9HAC8 227 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 KIF25-AS1Q9Y6Z4 181 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 CRYBG3Q68DQ2 2970 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 APOMO95445 188 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 TSPAN13O95857 204 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 NBL1P41271 181 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 BRD3OSQ6XYD6 125 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 TP53TG1Q9Y2A0 90 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 MOB4Q9Y3A3 225 aa6.59□□□□□ -1.35
TRIM6-212ENST00000621176 LOC107984156A0A0G2JMH3 177 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 IGIPA6NJ69 53 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 NDUFA4O00483 81 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 SRD5A1P18405 259 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 ARL17AQ8IVW1 177 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 MED14OSP0DP75 135 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 FOXI1Q12951 378 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 Q6ZS46 218 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 APRG1Q8IVJ8 170 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 ATP6V0BQ99437 205 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 A0A0J9YY99 117 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 A6NJY4 79 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 EDN2P20800 178 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 PSMB2P49721 201 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 POLR2KP53803 58 aaKnown RBP6.58□□□□□ -1.36
TRIM6-212ENST00000621176 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 DLX4Q92988 240 aaPredicted RBP6.58□□□□□ -1.36
TRIM6-212ENST00000621176 PTH2Q96A98 100 aa6.58□□□□□ -1.36
TRIM6-212ENST00000621176 CELSR2Q9HCU4 2923 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 IGHV4OR15-8A0A075B7B6 117 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 A0A087WW49 117 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 A0A087WWL8 130 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 CRIP2P52943 208 aaPredicted RBP6.57□□□□□ -1.36
TRIM6-212ENST00000621176 NXPH4O95158 308 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 UBE2D3P61077 147 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 UBE2D2P62837 147 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 CLEC2AQ6UVW9 174 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 NDUFA11Q86Y39 141 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 ZNF418Q8TF45 676 aaPredicted RBP6.57□□□□□ -1.36
TRIM6-212ENST00000621176 RHPN1-AS1Q9BWJ2 59 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 C1QTNF4Q9BXJ3 329 aa6.57□□□□□ -1.36
TRIM6-212ENST00000621176 PPP1R17O96001 155 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms