RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PFN2P35080 140 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 MBD6Q96DN6 1003 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 C1QTNF4Q9BXJ3 329 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 Q6AWC8 147 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 RASL11AQ6T310 242 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 SHANK2-AS3Q9BTD1 123 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 TOMM40O96008 361 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 CTRLP40313 264 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 GAGE6Q13070 117 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 TRAV9-2A0A087WT02 112 aa6.46□□□□□ -1.37
PTPDC1-204ENST00000620992 S100A7L2Q5SY68 101 aa6.46□□□□□ -1.37
PTPDC1-204ENST00000620992 WIPF2Q8TF74 440 aaPredicted RBP6.46□□□□□ -1.37
PTPDC1-204ENST00000620992 SPOCK3Q9BQ16 436 aa6.46□□□□□ -1.37
PTPDC1-204ENST00000620992 VPREB3Q9UKI3 123 aa6.46□□□□□ -1.37
PTPDC1-204ENST00000620992 FAM223BA6NKX1 122 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 INS-IGF2F8WCM5 200 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 FAM223AQ8IWN6 122 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 GTSF1Q8WW33 167 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 TMEM158Q8WZ71 300 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 TP73-AS1Q9UF72 201 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 KALRNO60229 2985 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 A0A1B0GWB2 263 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 hDV102S1A0JD36 115 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 IGLL1P15814 213 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 ANXA2RQ3ZCQ2 193 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 MRPL52Q86TS9 123 aaKnown RBP6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 LINC00311Q8N616 119 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 PIFOQ8TCI5 191 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 MS4A6AQ9H2W1 248 aa6.46□□□□□ -1.38
PTPDC1-204ENST00000620992 H3BUT2 72 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 LINC00173Q6ZV60 143 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 ATP5L2Q7Z4Y8 100 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 GATD1Q8NB37 220 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 ZNF292O60281 2723 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 NOP10Q9NPE3 64 aaKnown RBP6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 INAFM1C9JVW0 142 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 GP9P14770 177 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 DTX2Q86UW9 622 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 CHTOPQ9Y3Y2 248 aaKnown RBP6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 GNRH2O43555 120 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 FSTL3O95633 263 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 AZU1P20160 251 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 NBEAL1Q6ZS30 2694 aa6.45□□□□□ -1.38
PTPDC1-204ENST00000620992 IGLC1P0CG04 106 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 MYCNOSP40205 109 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 PRIMA1Q86XR5 153 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 C10orf105Q8TEF2 133 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 AJUBAQ96IF1 538 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 DPM2O94777 84 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 PRSS57Q6UWY2 283 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 Q86TA4 180 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 IGLV10-54A0A075B6I4 117 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 LTAP01374 205 aa6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 KLF5Q13887 457 aaPredicted RBP6.44□□□□□ -1.38
PTPDC1-204ENST00000620992 IGHV1-24A0A0C4DH33 117 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 C2orf70A6NJV1 201 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 A0A1B0GXF2 115 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 CRYGCP07315 174 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 FOXE3Q13461 319 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 ORMDL2Q53FV1 153 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 Q6ZQT7 251 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 SPATA12Q7Z6I5 190 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 MLST8Q9BVC4 326 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 KLF12Q9Y4X4 402 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 TRBV19A0A075B6N1 114 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 LINC01548A6NM66 108 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 PPBPP02775 128 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 PRB2P02812 416 aaPredicted RBP6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 CDKN1BP46527 198 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 LAGE3Q14657 143 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 MRGPRG-AS1Q2M3A8 158 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 IGHV7-81A0A0B4J1V7 117 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 PAX2Q02962 417 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 DEFB135Q30KP9 77 aa6.43□□□□□ -1.38
PTPDC1-204ENST00000620992 PLNP26678 52 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 TMEM86BQ8N661 226 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 ZNF491Q8N8L2 437 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 KAAG1Q9UBP8 84 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 TEX22C9J3V5 150 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 K7ERU9 68 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 VCYO14598 125 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 C8orf31Q8N9H6 132 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 C19orf71A6NCJ1 209 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 ZC2HC1AQ96GY0 325 aa6.42□□□□□ -1.38
PTPDC1-204ENST00000620992 H3BMM0 161 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 IGKV1-17P01599 117 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 IGLV1-47P01700 117 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 MPV17L2Q567V2 206 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 UBE2WQ96B02 151 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 ZNF492Q9P255 531 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 IGHV1OR15-1A0A075B7D0 117 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 CT83Q5H943 113 aa6.41□□□□□ -1.38
PTPDC1-204ENST00000620992 CHCHD1Q96BP2 118 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms