RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 TRAV21A0A0B4J279 112 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 GNRH2O43555 120 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 TYMSP04818 313 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 CRIP1P50238 77 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 PPT1P50897 306 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 CRYBA4P53673 196 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 FHL2Q14192 279 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 TMEM183BQ1AE95 376 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 TDRG1Q3Y452 100 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 SMUG1Q53HV7 270 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 LYPD5Q6UWN5 251 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 ZC2HC1AQ96GY0 325 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 TCEAL7Q9BRU2 100 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 MANBALQ9NQG1 85 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 PGPEP1Q9NXJ5 209 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 PRO0255Q9UI72 69 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 HHLA3Q9XRX5 114 aa7.62□□□□□ -1.19
TARDBP-221ENST00000619555 TRBV6-1A0A0K0K1D8 114 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 FBLL1A6NHQ2 334 aaKnown RBP7.61□□□□□ -1.19
TARDBP-221ENST00000619555 LTAP01374 205 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 PFN1P07737 140 aaKnown RBP7.61□□□□□ -1.19
TARDBP-221ENST00000619555 AKR1C3P42330 323 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 FAM159AQ6UWV7 190 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 TMEM183AQ8IXX5 376 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 LYPD6BQ8NI32 183 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 FMC1Q96HJ9 113 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 DERL1Q9BUN8 251 aa7.61□□□□□ -1.19
TARDBP-221ENST00000619555 IGKV3D-20A0A0C4DH25 116 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 IGHV3-16A0A0C4DH30 117 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 SFTA3P0C7M3 94 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 BCL2P10415 239 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 UBE2G1P62253 170 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 ZNF415Q09FC8 603 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 SLAQ13239 276 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 MRPL23Q16540 153 aaKnown RBP7.6□□□□□ -1.19
TARDBP-221ENST00000619555 SAPCD1Q5SSQ6 148 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 NHLRC2Q8NBF2 726 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 C11orf52Q96A22 123 aa7.6□□□□□ -1.19
TARDBP-221ENST00000619555 TRGV11A0A075B6L2 103 aa7.59□□□□□ -1.19
TARDBP-221ENST00000619555 TRGV4A0A0C4DH28 118 aa7.59□□□□□ -1.19
TARDBP-221ENST00000619555 TEX46H3BTG2 121 aa7.59□□□□□ -1.19
TARDBP-221ENST00000619555 MEF2BQ02080 365 aaPredicted RBP7.59□□□□□ -1.19
TARDBP-221ENST00000619555 ZNF479Q96JC4 524 aa7.59□□□□□ -1.19
TARDBP-221ENST00000619555 ZFP30Q9Y2G7 519 aa7.59□□□□□ -1.19
TARDBP-221ENST00000619555 K7EQD1 137 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 SH2D1AO60880 128 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 RPL35P42766 123 aaKnown RBP7.58□□□□□ -1.2
TARDBP-221ENST00000619555 ERVFC1-1P60608 527 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 BLOC1S1P78537 153 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 NEGR1Q7Z3B1 354 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 PCNPQ8WW12 178 aaKnown RBP7.58□□□□□ -1.2
TARDBP-221ENST00000619555 MLST8Q9BVC4 326 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 SDF2L1Q9HCN8 221 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
TARDBP-221ENST00000619555 DMBT1Q9UGM3 2413 aaPredicted RBP7.57□□□□□ -1.2
TARDBP-221ENST00000619555 FABP5P3A8MUU1 101 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 EREGO14944 169 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 IFNA1P01562 189 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 IGLV2-8P01709 118 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 DNAH10OSP0CZ25 163 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 RNASE3P12724 160 aaKnown RBP7.57□□□□□ -1.2
TARDBP-221ENST00000619555 GYPEP15421 78 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 SRIP30626 198 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 ZNF674Q2M3X9 581 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
TARDBP-221ENST00000619555 TEX261Q6UWH6 196 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 WFDC10BQ8IUB3 73 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 RASL10AQ92737 203 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 KCNS1Q96KK3 526 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 SPXQ9BT56 116 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 VAX2Q9UIW0 290 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
TARDBP-221ENST00000619555 TRBV20OR9-2A0A075B6H5 130 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 TRAV9-2A0A087WT02 112 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 A0A087WTM6 91 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 RAB19A4D1S5 217 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 M0R036 132 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 S100A9P06702 114 aaKnown RBP7.56□□□□□ -1.2
TARDBP-221ENST00000619555 XGP55808 180 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 FAM162BQ5T6X4 162 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 NFE4Q86UQ8 179 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 BAGE2Q86Y30 109 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 TXNDC17Q9BRA2 123 aa7.56□□□□□ -1.2
TARDBP-221ENST00000619555 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
TARDBP-221ENST00000619555 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 PGPEP1LA6NFU8 196 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 EPM2AB3EWF7 344 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 PDE6DO43924 150 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 KRTAP10-1P60331 282 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 CENPWQ5EE01 88 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 ZNF506Q5JVG8 444 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 MSRB1Q9NZV6 116 aa7.55□□□□□ -1.2
TARDBP-221ENST00000619555 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
TARDBP-221ENST00000619555 LOC100131303A0A0U1RQF7 123 aa7.54□□□□□ -1.2
TARDBP-221ENST00000619555 GRIFINA4D1Z8 144 aa7.54□□□□□ -1.2
TARDBP-221ENST00000619555 RBFOX3A6NFN3 312 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms