RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 C22orf42Q6IC83 251 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 LINC00337Q8N6G1 96 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 OR10G7Q8NGN6 311 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 OR2G3Q8NGZ4 309 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 GLYATL2Q8WU03 294 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 YIPF6Q96EC8 236 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 PARLQ9H300 379 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 JPT2Q9H910 190 aa3.87□□□□□ -1.79
SCAMP1-206ENST00000618166 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 CIDEAO60543 219 aa3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 RBX1P62877 108 aa3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 EIF5AP63241 154 aaKnown RBP3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 CLVS1Q8IUQ0 354 aaPredicted RBP3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 TYMSOSQ8TAI1 123 aa3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 SOSTQ9BQB4 213 aa3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 TPRKBQ9Y3C4 175 aa3.86□□□□□ -1.79
SCAMP1-206ENST00000618166 TRBV19A0A075B6N1 114 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 TGFBR1P36897 503 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 FGF8P55075 233 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 RAB11AP62491 216 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 REG3AQ06141 175 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 SLC38A11Q08AI6 406 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 PRSS48Q7RTY5 328 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 LINC00526Q96FQ7 95 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 ZNF486Q96H40 463 aaPredicted RBP3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 KCNS1Q96KK3 526 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 CHCHD5Q9BSY4 110 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 FUNDC2Q9BWH2 189 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 SCN3BQ9NY72 215 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 NDUFA13Q9P0J0 144 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 COPZ2Q9P299 210 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 RSL24D1Q9UHA3 163 aaKnown RBP3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
SCAMP1-206ENST00000618166 A0A087WZ39 114 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 TRBV6-8A0A0A6YYG3 113 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 CCDC160A6NGH7 325 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 H3BMQ9 156 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 AGPAT2O15120 278 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 ATP5IP56385 69 aaPredicted RBP3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 SUMO1P63165 101 aaKnown RBP3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 MLLT11Q13015 90 aaPredicted RBP3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 GAGE2BQ13066 116 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 CTF1Q16619 201 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 UFSP1Q6NVU6 142 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 BLOC1S6Q9UL45 172 aa3.84□□□□□ -1.79
SCAMP1-206ENST00000618166 A0A0A6YYH2 397 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 A6NJ64 397 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 H3BP45 60 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 EIF3GO75821 320 aaKnown RBP eCLIP3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 PTTG1O95997 202 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 HIST1H1EP10412 219 aaKnown RBP3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 TMBIM6P55061 237 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 VBP1P61758 197 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 LSM3P62310 102 aaKnown RBP3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 GAGE6Q13070 117 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 C9orf116Q5BN46 136 aaPredicted RBP3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 LHFPL1Q86WI0 220 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 SLC39A9Q9NUM3 307 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 ANAPC11Q9NYG5 84 aa3.83□□□□□ -1.8
SCAMP1-206ENST00000618166 F6UZH7 168 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 COX7A2P2O60397 106 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 TSHBP01222 138 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 PYYP10082 97 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 UBE2D3P61077 147 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 NCS1P62166 190 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 UBE2D2P62837 147 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 SMCO1Q147U7 214 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 ZFP2Q6ZN57 461 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 OPRPNQ99935 248 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-206ENST00000618166 TRDV1A0A1B0GX56 115 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 B3GALNT1O75752 331 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 RRAS2P62070 204 aaPredicted RBP3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 SELENOTP62341 195 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 C10orf113Q5VZT2 155 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 NTM-AS1Q6ZSK4 140 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 LYZL2Q7Z4W2 148 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 S100A7AQ86SG5 101 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 ASB13Q8WXK3 278 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 ATP5SQ99766 215 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 NAA60Q9H7X0 242 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 VCX3AQ9NNX9 186 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 PRELID1Q9Y255 219 aa3.81□□□□□ -1.8
SCAMP1-206ENST00000618166 GVQW2A0A096LPI5 108 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 TRBV7-9A0A0J9YWB2 115 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 WRBO00258 174 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 RNASE3P12724 160 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 RAB2AP61019 212 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 MXD1Q05195 221 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 SPANXN5Q5MJ07 72 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 LINC00304Q8N9R0 145 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 DYNC2LI1Q8TCX1 351 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 GPX8Q8TED1 209 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 RTBDNQ9BSG5 229 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 COMMD3Q9UBI1 195 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 RNF24Q9Y225 148 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 TIMM9Q9Y5J7 89 aa3.8□□□□□ -1.8
SCAMP1-206ENST00000618166 IGLV4-60A0A075B6I1 120 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms