RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 TRBV20-1A0A075B6N2 111 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 A6NDX4 124 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 USMG5Q96IX5 58 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 PRAC2D3DTV9 90 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 IGHG2P01859 326 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 CLEC3BP05452 202 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 ODF1Q14990 250 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 C9orf47Q6ZRZ4 202 aa8.3□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 OR11H12B2RN74 326 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 OR11H1Q8NG94 326 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 OR11H2Q8NH07 326 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 RAX2Q96IS3 184 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 TRAV41A0A0B4J266 112 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 FOXI2Q6ZQN5 318 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 B5MCH6 92 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 RNF183Q96D59 192 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 CCL19Q99731 98 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 LINC00527Q9UJ94 153 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 DCHS2Q6V1P9 2916 aa8.29□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 TRBV7-9A0A0J9YWB2 115 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 IL17RELQ6ZVW7 336 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 IGHV4-4A0A075B6R2 117 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 NDUFA4O00483 81 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 CFHR3Q02985 330 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 METTL26Q96S19 204 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 CFAP46Q8IYW2 2715 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 IGHV4-61A0A0C4DH41 118 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 TMEM89A2RUT3 159 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 Q1RN00 199 aa8.28□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 FABP5P3A8MUU1 101 aa8.27□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 IGLV1-40P01703 118 aa8.27□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 S100A4P26447 101 aaKnown RBP8.27□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 PRSS29PA6NIE9 313 aa8.27□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 HOXA3O43365 443 aaPredicted RBP8.27□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 DPF1Q92782 380 aa8.27□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 ANAPC13Q9BS18 74 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 HHLA3Q9XRX5 114 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 CHD6Q8TD26 2715 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 APRG1Q8IVJ8 170 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 G3V318 75 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 SLC25A16P16260 332 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 WNK1Q9H4A3 2382 aa8.26□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 SOCS3O14543 225 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 MSMBP08118 114 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 CLEC19AQ6UXS0 136 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 C9orf139Q6ZV77 190 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 FAM19A4Q96LR4 140 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 J3QLI3 93 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 NPC2P61916 151 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 PTPN13Q12923 2485 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 A0A096LNT2 108 aa8.25□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 F5H697 171 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 F8W1H4 67 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 XGP55808 180 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 C8orf86Q6ZUL3 223 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 PLEKHB2Q96CS7 222 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 B4DSR2 109 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 K7EMT4 169 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 RRN3P1Q2M238 152 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 E9PLD3 99 aa8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 RPL39LQ96EH5 51 aaKnown RBP8.24□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 NFE4Q86UQ8 179 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 SRD5A1P18405 259 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 PSMG4Q5JS54 123 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 RNF185Q96GF1 192 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 LINC00477Q96M19 166 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 TMEM78Q5T7P6 136 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 PRADC1Q9BSG0 188 aa8.23□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 IGHV4-30-2A0A087WSY4 118 aa8.22□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 FOXI1Q12951 378 aa8.22□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 ADARB2-AS1A8MUL3 147 aa8.22□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 OVOL1O14753 267 aa8.22□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 LAGE3Q14657 143 aa8.22□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 PHLDA1Q8WV24 401 aaPredicted RBP8.22□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 IGHV3OR16-10A0A075B7F0 116 aa8.21□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 SIVA1O15304 175 aa8.21□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 FSHBP01225 129 aa8.21□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 IGKV3-20P01619 116 aa8.21□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 IGHV4-38-2P0DP08 117 aa8.21□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 GPHB5Q86YW7 130 aa8.21□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 NXT2Q9NPJ8 142 aaKnown RBP8.21□□□□□ -1.09
SENP3-EIF4A1-201ENST00000614237 HTN1P15515 57 aa8.21□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 ATP5J2P56134 94 aa8.21□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 IGKV3D-20A0A0C4DH25 116 aa8.21□□□□□ -1.1
SENP3-EIF4A1-201ENST00000614237 PRSS2P07478 247 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms