RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SBSPONQ8IVN8 264 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 KIR2DL5AQ8N109 375 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 Q8TAT8 98 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 C14orf144Q96I85 54 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 MAP6D1Q9H9H5 199 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 PPP1R14DQ9NXH3 145 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 IGLC6P0CF74 106 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 ZNF705DP0CH99 300 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 ZNF705BP0CI00 300 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 CTRLP40313 264 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 ID1P41134 155 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 DEFB131AP59861 70 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 SNRPD3P62318 126 aaKnown RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 ERCC8Q13216 396 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 LYZL1Q6UWQ5 148 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 FAM19A2Q8N3H0 131 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 RNF182Q8N6D2 247 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
SMAD4-217ENST00000611848 CHCHD1Q96BP2 118 aaKnown RBP6.51□□□□□ -1.37
SMAD4-217ENST00000611848 FABP5P3A8MUU1 101 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 HSBP1O75506 76 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 C3orf79P0CE67 100 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 KRTDAPP60985 99 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 APRG1Q8IVJ8 170 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 AGPAT4-IT1Q9H0P7 198 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 M0R2Z0 102 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 SOCS3O14543 225 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 ZNF688P0C7X2 276 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 ZNF138P52744 262 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 RNASEKQ6P5S7 137 aaKnown RBP6.5□□□□□ -1.37
SMAD4-217ENST00000611848 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 SPATA25Q9BR10 227 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 TM2D3Q9BRN9 247 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 CNFNQ9BYD5 112 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 U3KQK5 164 aa6.5□□□□□ -1.37
SMAD4-217ENST00000611848 TMSB15BA0A087X1C1 80 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 LINC00614P0C842 121 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 RAB4AP20338 218 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 NTF3P20783 257 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 APOC4P55056 127 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 HIST1H1AQ02539 215 aaPredicted RBP6.49□□□□□ -1.37
SMAD4-217ENST00000611848 ZNF124Q15973 351 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 TDRG1Q3Y452 100 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 PSMG4Q5JS54 123 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 TMEM78Q5T7P6 136 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 FAM104BQ5XKR9 115 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 STHQ8IWL8 128 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 FER1L6-AS1Q8NA97 138 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 KIR2DL5BQ8NHK3 375 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 C16orf92Q96LL3 132 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 LENEPQ9Y5L5 61 aa6.49□□□□□ -1.37
SMAD4-217ENST00000611848 COL7A1Q02388 2944 aa6.48□□□□□ -1.37
SMAD4-217ENST00000611848 NBEAL2Q6ZNJ1 2754 aa6.48□□□□□ -1.37
SMAD4-217ENST00000611848 EBLN2Q6P2I7 272 aa6.48□□□□□ -1.37
SMAD4-217ENST00000611848 C20orf173Q96LM9 149 aa6.48□□□□□ -1.37
SMAD4-217ENST00000611848 TPPP3Q9BW30 176 aa6.48□□□□□ -1.37
SMAD4-217ENST00000611848 STAB2Q8WWQ8 2551 aa6.48□□□□□ -1.37
SMAD4-217ENST00000611848 IGKV3D-20A0A0C4DH25 116 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 IGHV1-24A0A0C4DH33 117 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 ORM1P02763 201 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 OR5AL1P0C617 328 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 RPL35AP18077 110 aaKnown RBP6.47□□□□□ -1.37
SMAD4-217ENST00000611848 VAMP8Q9BV40 100 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 CSTL1Q9H114 145 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 CRXO43186 299 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-217ENST00000611848 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
SMAD4-217ENST00000611848 FOXI2Q6ZQN5 318 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 LINC00477Q96M19 166 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 TMEM191AQ9H0A3 160 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 C11orf21Q9P2W6 132 aa6.47□□□□□ -1.37
SMAD4-217ENST00000611848 KNCNA6PVL3 124 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 HLA-DRB4P13762 266 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 TWIST1Q15672 202 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 PMCHL1Q16048 86 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 MRPL51Q4U2R6 128 aaKnown RBP6.46□□□□□ -1.38
SMAD4-217ENST00000611848 LBHQ53QV2 105 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-217ENST00000611848 MORN3Q6PF18 240 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-217ENST00000611848 TRPT1Q86TN4 253 aaKnown RBP6.46□□□□□ -1.38
SMAD4-217ENST00000611848 AMN1Q8IY45 258 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 ZNF738Q8NE65 137 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 FAM19A4Q96LR4 140 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 TP53TG1Q9Y2A0 90 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 HLA-DRB4X5D2U9 266 aa6.46□□□□□ -1.38
SMAD4-217ENST00000611848 TRBV7-9A0A0J9YWB2 115 aa6.45□□□□□ -1.38
SMAD4-217ENST00000611848 D6R8Y8 96 aa6.45□□□□□ -1.38
SMAD4-217ENST00000611848 H3BMM0 161 aa6.45□□□□□ -1.38
SMAD4-217ENST00000611848 NUTF2P61970 127 aaKnown RBP6.45□□□□□ -1.38
SMAD4-217ENST00000611848 ORMDL3Q8N138 153 aa6.45□□□□□ -1.38
SMAD4-217ENST00000611848 PRELID3AQ96N28 172 aa6.45□□□□□ -1.38
SMAD4-217ENST00000611848 C2orf88Q9BSF0 95 aa6.45□□□□□ -1.38
SMAD4-217ENST00000611848 TMEM70Q9BUB7 260 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms