RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
MSH6-212ENST00000607272 ZNF292O60281 2723 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 OVOL1O14753 267 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 GLMPQ8WWB7 406 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 DCHS2Q6V1P9 2916 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 IGF1P05019 195 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 CKS1BP61024 79 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 LCNL1Q6ZST4 164 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 CACNA1BQ00975 2339 aa9.47□□□□□ -0.89
MSH6-212ENST00000607272 IGHV1-69DA0A0B4J2H0 117 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 LOC107984156A0A0G2JMH3 177 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 MGPP08493 103 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 UBE2D3P61077 147 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 HERVK_113P61574 105 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 UBE2D2P62837 147 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 ARL17AQ8IVW1 177 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 AJUBAQ96IF1 538 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 C20orf173Q96LM9 149 aa9.46□□□□□ -0.89
MSH6-212ENST00000607272 RIF1Q5UIP0 2472 aaKnown RBP9.46□□□□□ -0.9
MSH6-212ENST00000607272 LINC01548A6NM66 108 aa9.46□□□□□ -0.9
MSH6-212ENST00000607272 TSPAN13O95857 204 aa9.46□□□□□ -0.9
MSH6-212ENST00000607272 CD7P09564 240 aa9.46□□□□□ -0.9
MSH6-212ENST00000607272 PSMB2P49721 201 aa9.46□□□□□ -0.9
MSH6-212ENST00000607272 SMCPP49901 116 aaPredicted RBP9.46□□□□□ -0.9
MSH6-212ENST00000607272 TLN1Q9Y490 2541 aaKnown RBP9.45□□□□□ -0.9
MSH6-212ENST00000607272 RPL32P62910 135 aaKnown RBP9.45□□□□□ -0.9
MSH6-212ENST00000607272 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
MSH6-212ENST00000607272 SYT8Q8NBV8 401 aa9.45□□□□□ -0.9
MSH6-212ENST00000607272 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
MSH6-212ENST00000607272 VCX2Q9H322 139 aa9.45□□□□□ -0.9
MSH6-212ENST00000607272 TRBV20-1A0A075B6N2 111 aa9.44□□□□□ -0.9
MSH6-212ENST00000607272 FAM223BA6NKX1 122 aa9.44□□□□□ -0.9
MSH6-212ENST00000607272 SAA4P35542 130 aa9.44□□□□□ -0.9
MSH6-212ENST00000607272 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
MSH6-212ENST00000607272 FAM223AQ8IWN6 122 aa9.44□□□□□ -0.9
MSH6-212ENST00000607272 POM121L12Q8N7R1 296 aa9.44□□□□□ -0.9
MSH6-212ENST00000607272 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 A0A087WW49 117 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 TRBV7-9A0A0J9YWB2 115 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 SPRY2O43597 315 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 DUSP14O95147 198 aaKnown RBP9.43□□□□□ -0.9
MSH6-212ENST00000607272 CRYGDP07320 174 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 ZFP2Q6ZN57 461 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 NDUFA11Q86Y39 141 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 KLHL30-AS1Q8NEE0 82 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 PPDPFLQ8WWR9 84 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 RAX2Q96IS3 184 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 A0A0J9YY99 117 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 CCL21O00585 134 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 RNASE4P34096 147 aaKnown RBP9.43□□□□□ -0.9
MSH6-212ENST00000607272 PMVKQ15126 192 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 C5orf56Q8N8D9 126 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 TMEM141Q96I45 108 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
MSH6-212ENST00000607272 IGLV4-69A0A075B6H9 119 aa9.42□□□□□ -0.9
MSH6-212ENST00000607272 IGIPA6NJ69 53 aa9.42□□□□□ -0.9
MSH6-212ENST00000607272 SOCS3O14543 225 aa9.42□□□□□ -0.9
MSH6-212ENST00000607272 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
MSH6-212ENST00000607272 ARL3P36405 182 aa9.42□□□□□ -0.9
MSH6-212ENST00000607272 TEN1Q86WV5 123 aa9.42□□□□□ -0.9
MSH6-212ENST00000607272 APRG1Q8IVJ8 170 aa9.42□□□□□ -0.9
MSH6-212ENST00000607272 MED13LQ71F56 2210 aa9.42□□□□□ -0.9
MSH6-212ENST00000607272 TRAV41A0A0B4J266 112 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 NXPH4O95158 308 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 CRYBA4P53673 196 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 RPL11P62913 178 aaKnown RBP9.41□□□□□ -0.9
MSH6-212ENST00000607272 ZNF418Q8TF45 676 aaPredicted RBP9.41□□□□□ -0.9
MSH6-212ENST00000607272 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 NDUFA4O00483 81 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 GNRH2O43555 120 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 TSHBP01222 138 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 SPINK8P0C7L1 97 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 KIR2DL4Q99706 377 aa9.41□□□□□ -0.9
MSH6-212ENST00000607272 VCYO14598 125 aa9.4□□□□□ -0.9
MSH6-212ENST00000607272 POLR2KP53803 58 aaKnown RBP9.4□□□□□ -0.9
MSH6-212ENST00000607272 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
MSH6-212ENST00000607272 TIMM17AQ99595 171 aa9.4□□□□□ -0.9
MSH6-212ENST00000607272 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
MSH6-212ENST00000607272 SPTA1P02549 2419 aa9.4□□□□□ -0.9
MSH6-212ENST00000607272 K7ENP7 123 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 NPFFO15130 113 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 IGHV3-30P01768 117 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 CRIP2P52943 208 aaPredicted RBP9.4□□□□□ -0.91
MSH6-212ENST00000607272 LINC00315P59091 139 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 SBSPONQ8IVN8 264 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.91
MSH6-212ENST00000607272 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.91
MSH6-212ENST00000607272 A8MWV9 139 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 TCL1BO95988 128 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 CFC1BP0CG36 223 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 CFC1P0CG37 223 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 UNQ9165/PRO28630Q6UXU0 137 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 Q6ZUT4 128 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 MOB4Q9Y3A3 225 aa9.39□□□□□ -0.91
MSH6-212ENST00000607272 AVPP01185 164 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms