RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 RASL11AQ6T310 242 aa9.82□□□□□ -0.84
IRF3-225ENST00000600022 ATP5L2Q7Z4Y8 100 aa9.82□□□□□ -0.84
IRF3-225ENST00000600022 NEU1Q99519 415 aa9.82□□□□□ -0.84
IRF3-225ENST00000600022 TRAV21A0A0B4J279 112 aa9.81□□□□□ -0.84
IRF3-225ENST00000600022 F6UB75 175 aa9.81□□□□□ -0.84
IRF3-225ENST00000600022 MT-ND6P03923 174 aa9.81□□□□□ -0.84
IRF3-225ENST00000600022 S100A8P05109 93 aa9.81□□□□□ -0.84
IRF3-225ENST00000600022 DEFB1P60022 68 aa9.81□□□□□ -0.84
IRF3-225ENST00000600022 KRTAP4-5Q9BYR2 181 aa9.81□□□□□ -0.84
IRF3-225ENST00000600022 TRAV10A0A0B4J240 114 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 A8MTW9 85 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 MIFP14174 115 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 CRISP2P16562 243 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 CRIP1P50238 77 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 RAB4BP61018 213 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
IRF3-225ENST00000600022 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 DEFB131BA0A096LNP1 70 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 A0A1B0GW15 77 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 SPINK4O60575 86 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 S100A6P06703 90 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 HLA-DRB4P13762 266 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 RNASE4P34096 147 aaKnown RBP9.79□□□□□ -0.84
IRF3-225ENST00000600022 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
IRF3-225ENST00000600022 RIGQ13278 110 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 GDF5OSQ5U4N7 250 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 FRZBQ92765 325 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 FAM19A4Q96LR4 140 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 GNB1LQ9BYB4 327 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 HLA-DRB4X5D2U9 266 aa9.79□□□□□ -0.84
IRF3-225ENST00000600022 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
IRF3-225ENST00000600022 J3KRW8 73 aa9.78□□□□□ -0.84
IRF3-225ENST00000600022 HLA-DQA1P01909 254 aa9.78□□□□□ -0.84
IRF3-225ENST00000600022 TRGC2P03986 189 aa9.78□□□□□ -0.84
IRF3-225ENST00000600022 MRPL54Q6P161 138 aaKnown RBP9.78□□□□□ -0.84
IRF3-225ENST00000600022 MORN3Q6PF18 240 aaPredicted RBP9.78□□□□□ -0.84
IRF3-225ENST00000600022 ZFAND2AQ8N6M9 145 aa9.78□□□□□ -0.84
IRF3-225ENST00000600022 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
IRF3-225ENST00000600022 XCL2Q9UBD3 114 aa9.78□□□□□ -0.84
IRF3-225ENST00000600022 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 SNURFLB1AK76 121 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 F2Z2F3 143 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 IGKV3-20P01619 116 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 CDKN1BP46527 198 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
IRF3-225ENST00000600022 HBBP68871 147 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 POM121L12Q8N7R1 296 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 FER1L6-AS1Q8NA97 138 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 CLUHP3Q96NS8 147 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 NAGKQ9UJ70 344 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 MUC4Q99102 2169 aa9.77□□□□□ -0.85
IRF3-225ENST00000600022 C7orf71A4D174 169 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 KLLNB2CW77 178 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 H3BMM0 161 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 AMBPP02760 352 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 GZMBP10144 247 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 FAM159AQ6UWV7 190 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 AMTNQ6UX39 209 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 GTSF1Q8WW33 167 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 KCNS1Q96KK3 526 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 HSPG2P98160 4391 aa9.76□□□□□ -0.85
IRF3-225ENST00000600022 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
IRF3-225ENST00000600022 MED14OSP0DP75 135 aa9.75□□□□□ -0.85
IRF3-225ENST00000600022 S100A4P26447 101 aaKnown RBP9.75□□□□□ -0.85
IRF3-225ENST00000600022 CAMPP49913 170 aa9.75□□□□□ -0.85
IRF3-225ENST00000600022 FXYD7P58549 80 aa9.75□□□□□ -0.85
IRF3-225ENST00000600022 NUTF2P61970 127 aaKnown RBP9.75□□□□□ -0.85
IRF3-225ENST00000600022 FABP9Q0Z7S8 132 aa9.75□□□□□ -0.85
IRF3-225ENST00000600022 ZFP82Q8N141 532 aa9.75□□□□□ -0.85
IRF3-225ENST00000600022 MRPL18Q9H0U6 180 aaKnown RBP9.75□□□□□ -0.85
IRF3-225ENST00000600022 ASIPP42127 132 aa9.74□□□□□ -0.85
IRF3-225ENST00000600022 EMP1P54849 157 aa9.74□□□□□ -0.85
IRF3-225ENST00000600022 PRR9Q5T870 116 aa9.74□□□□□ -0.85
IRF3-225ENST00000600022 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
IRF3-225ENST00000600022 SMIM15Q7Z3B0 74 aa9.74□□□□□ -0.85
IRF3-225ENST00000600022 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
IRF3-225ENST00000600022 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
IRF3-225ENST00000600022 APCSP02743 223 aa9.73□□□□□ -0.85
IRF3-225ENST00000600022 CTRLP40313 264 aa9.73□□□□□ -0.85
IRF3-225ENST00000600022 SPINK13Q1W4C9 94 aa9.73□□□□□ -0.85
IRF3-225ENST00000600022 ZNF575Q86XF7 245 aa9.73□□□□□ -0.85
IRF3-225ENST00000600022 A0A1B0GXF2 115 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 M0R2Z0 102 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 TRGC1P0CF51 173 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 P0DMU3 169 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 FAM231AP0DMU4 169 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 FAM231CP0DMU5 169 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 CACNG7P62955 275 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 GFI1BQ5VTD9 330 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 TMEM136Q6ZRR5 245 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 NDUFAF3Q9BU61 184 aa9.72□□□□□ -0.85
IRF3-225ENST00000600022 IGHV3OR16-12A0A075B7B8 117 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 IGKV3D-20A0A0C4DH25 116 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 INSP01308 110 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 ARMS2P0C7Q2 107 aa9.71□□□□□ -0.86
IRF3-225ENST00000600022 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms