RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 PARLQ9H300 379 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
TRIM28-210ENST00000597618 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
TRIM28-210ENST00000597618 PGPEP1LA6NFU8 196 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 CENPXA8MT69 81 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 A8MWV9 139 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 KHDC3LQ587J8 217 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 DGAT2L7PQ6IED9 249 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 GOLT1AQ6ZVE7 132 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 ARL6IP6Q8N6S5 226 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 TVP23CQ96ET8 276 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 NDFIP1Q9BT67 221 aa6.5□□□□□ -1.37
TRIM28-210ENST00000597618 PGPA6NDG6 321 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 USP17L23D6RBM5 183 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 TAAR5O14804 337 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 CRPP02741 224 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 BTCP35070 178 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 TAS2R45P59539 299 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 PIK3CD-AS1Q5SR53 167 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 DMRTA1Q5VZB9 504 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 C9orf163Q8N9P6 203 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 OR5C1Q8NGR4 320 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 OR2T35Q8NGX2 323 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 LINC00479Q96M42 142 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
TRIM28-210ENST00000597618 C17orf112F2Z3M2 114 aa6.48□□□□□ -1.37
TRIM28-210ENST00000597618 RAB32Q13637 225 aa6.48□□□□□ -1.37
TRIM28-210ENST00000597618 WDR61Q9GZS3 305 aaKnown RBP6.48□□□□□ -1.37
TRIM28-210ENST00000597618 C11orf21Q9P2W6 132 aa6.48□□□□□ -1.37
TRIM28-210ENST00000597618 Q9UF83 564 aa6.48□□□□□ -1.37
TRIM28-210ENST00000597618 PANO1I0J062 215 aa6.47□□□□□ -1.37
TRIM28-210ENST00000597618 RHODO00212 210 aa6.47□□□□□ -1.37
TRIM28-210ENST00000597618 HLA-DQA1P01909 254 aa6.47□□□□□ -1.37
TRIM28-210ENST00000597618 PRSS1P07477 247 aa6.47□□□□□ -1.37
TRIM28-210ENST00000597618 RNASE3P12724 160 aaKnown RBP6.47□□□□□ -1.37
TRIM28-210ENST00000597618 RPL19P84098 196 aaKnown RBP6.47□□□□□ -1.37
TRIM28-210ENST00000597618 LGALSLQ3ZCW2 172 aaPredicted RBP6.47□□□□□ -1.37
TRIM28-210ENST00000597618 C14orf178Q8N769 122 aaPredicted RBP6.47□□□□□ -1.37
TRIM28-210ENST00000597618 MBD2Q9UBB5 411 aa6.47□□□□□ -1.37
TRIM28-210ENST00000597618 SERTM2A0A1B0GWG4 89 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 GAS8-AS1O95177 125 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 GCGP01275 180 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 ZNF80P51504 273 aaPredicted RBP6.46□□□□□ -1.38
TRIM28-210ENST00000597618 NHLH2Q02577 135 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 IL15RAQ13261 267 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 CIRBPQ14011 172 aaKnown RBP6.46□□□□□ -1.38
TRIM28-210ENST00000597618 ZFP69Q49AA0 526 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 UFSP1Q6NVU6 142 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 ENHOQ6UWT2 76 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 TMEM75Q8N9X5 138 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 OR10G7Q8NGN6 311 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 OR2G3Q8NGZ4 309 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 LINC01600Q96MT4 127 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 OR5AC2Q9NZP5 309 aa6.46□□□□□ -1.38
TRIM28-210ENST00000597618 TMEM262E9PQX1 116 aa6.45□□□□□ -1.38
TRIM28-210ENST00000597618 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
TRIM28-210ENST00000597618 GNG5P63218 68 aa6.45□□□□□ -1.38
TRIM28-210ENST00000597618 C15orf54Q8N8G6 183 aa6.45□□□□□ -1.38
TRIM28-210ENST00000597618 RNF185Q96GF1 192 aa6.45□□□□□ -1.38
TRIM28-210ENST00000597618 SEC22CQ9BRL7 303 aa6.45□□□□□ -1.38
TRIM28-210ENST00000597618 K7EQM0 130 aa6.44□□□□□ -1.38
TRIM28-210ENST00000597618 MIAQ16674 131 aa6.44□□□□□ -1.38
TRIM28-210ENST00000597618 SMUG1Q53HV7 270 aa6.44□□□□□ -1.38
TRIM28-210ENST00000597618 PQLC2Q6ZP29 291 aa6.44□□□□□ -1.38
TRIM28-210ENST00000597618 SGK494Q96LW2 274 aa6.44□□□□□ -1.38
TRIM28-210ENST00000597618 JPT2Q9H910 190 aa6.44□□□□□ -1.38
TRIM28-210ENST00000597618 TRBV10-1A0A0K0K1A3 114 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
TRIM28-210ENST00000597618 PKIAP61925 76 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
TRIM28-210ENST00000597618 ODF1Q14990 250 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 MPV17L2Q567V2 206 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 FAM74A4Q5TZK3 123 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 CLRN3Q8NCR9 226 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 DPH3Q96FX2 82 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 IL36BQ9NZH7 164 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 PSG8Q9UQ74 426 aa6.43□□□□□ -1.38
TRIM28-210ENST00000597618 TRAV6A0A075B6T7 132 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 A0A087WYN8 130 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 TRBV6-8A0A0A6YYG3 113 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 A0A0J9YXV3 536 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 EIF3GO75821 320 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRIM28-210ENST00000597618 TCRBP04435 133 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 TCRAP04437 139 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 UBE2D3P61077 147 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 UBE2D2P62837 147 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 RPL36AP83881 106 aaKnown RBP6.42□□□□□ -1.38
TRIM28-210ENST00000597618 C5orf17Q8NAS9 161 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 RPL36ALQ969Q0 106 aaKnown RBP6.42□□□□□ -1.38
TRIM28-210ENST00000597618 NUDT15Q9NV35 164 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 LPAP08519 4548 aa6.42□□□□□ -1.38
TRIM28-210ENST00000597618 TRBV7-3A0A075B6L6 115 aa6.41□□□□□ -1.38
TRIM28-210ENST00000597618 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
TRIM28-210ENST00000597618 IGKV3D-20A0A0C4DH25 116 aa6.41□□□□□ -1.38
TRIM28-210ENST00000597618 A0A1W2PPV4 95 aa6.41□□□□□ -1.38
TRIM28-210ENST00000597618 PHOX2AO14813 284 aa6.41□□□□□ -1.38
TRIM28-210ENST00000597618 IL7P13232 177 aa6.41□□□□□ -1.38
TRIM28-210ENST00000597618 FLI1Q01543 452 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms