RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 HOXA5P20719 270 aa16.86■□□□□ 0.29
SPTBN4-210ENST00000596900 RBMY1FQ15415 496 aaKnown RBP16.86■□□□□ 0.29
SPTBN4-210ENST00000596900 FAM104BQ5XKR9 115 aa16.86■□□□□ 0.29
SPTBN4-210ENST00000596900 MSRB1Q9NZV6 116 aa16.86■□□□□ 0.29
SPTBN4-210ENST00000596900 IGLL1P15814 213 aa16.85■□□□□ 0.29
SPTBN4-210ENST00000596900 Q0VG73 95 aa16.85■□□□□ 0.29
SPTBN4-210ENST00000596900 MORN3Q6PF18 240 aaPredicted RBP16.85■□□□□ 0.29
SPTBN4-210ENST00000596900 TMEM256Q8N2U0 113 aa16.85■□□□□ 0.29
SPTBN4-210ENST00000596900 XCL2Q9UBD3 114 aa16.85■□□□□ 0.29
SPTBN4-210ENST00000596900 IGHV3-16A0A0C4DH30 117 aa16.84■□□□□ 0.29
SPTBN4-210ENST00000596900 M0R381 172 aa16.84■□□□□ 0.29
SPTBN4-210ENST00000596900 ALKBH7Q9BT30 221 aaPredicted RBP16.84■□□□□ 0.29
SPTBN4-210ENST00000596900 C1QTNF4Q9BXJ3 329 aa16.84■□□□□ 0.29
SPTBN4-210ENST00000596900 LINC00467Q9BRT7 94 aa16.84■□□□□ 0.29
SPTBN4-210ENST00000596900 TP53TG3Q9ULZ0 132 aa16.84■□□□□ 0.29
SPTBN4-210ENST00000596900 DMRTA1Q5VZB9 504 aa16.83■□□□□ 0.28
SPTBN4-210ENST00000596900 BAGE3Q86Y29 109 aa16.83■□□□□ 0.28
SPTBN4-210ENST00000596900 AMN1Q8IY45 258 aa16.83■□□□□ 0.28
SPTBN4-210ENST00000596900 LINC01587Q99440 93 aa16.83■□□□□ 0.28
SPTBN4-210ENST00000596900 TMEM208Q9BTX3 173 aa16.83■□□□□ 0.28
SPTBN4-210ENST00000596900 PRR31Q5SQ13 230 aa16.82■□□□□ 0.28
SPTBN4-210ENST00000596900 C9orf85Q96MD7 179 aa16.82■□□□□ 0.28
SPTBN4-210ENST00000596900 FBN1P35555 2871 aaKnown RBP16.82■□□□□ 0.28
SPTBN4-210ENST00000596900 DEFB125Q8N687 156 aa16.82■□□□□ 0.28
SPTBN4-210ENST00000596900 HTN1P15515 57 aa16.81■□□□□ 0.28
SPTBN4-210ENST00000596900 RPL35AP18077 110 aaKnown RBP16.81■□□□□ 0.28
SPTBN4-210ENST00000596900 VWFP04275 2813 aa16.81■□□□□ 0.28
SPTBN4-210ENST00000596900 NXPH4O95158 308 aa16.8■□□□□ 0.28
SPTBN4-210ENST00000596900 S100A2P29034 98 aa16.8■□□□□ 0.28
SPTBN4-210ENST00000596900 SYT8Q8NBV8 401 aa16.8■□□□□ 0.28
SPTBN4-210ENST00000596900 C18orf32Q8TCD1 76 aa16.8■□□□□ 0.28
SPTBN4-210ENST00000596900 AP1S3Q96PC3 154 aa16.8■□□□□ 0.28
SPTBN4-210ENST00000596900 MDFICQ9P1T7 246 aa16.8■□□□□ 0.28
SPTBN4-210ENST00000596900 EVI2AP22794 236 aa16.8■□□□□ 0.28
SPTBN4-210ENST00000596900 ZNF415Q09FC8 603 aa16.79■□□□□ 0.28
SPTBN4-210ENST00000596900 ORMDL3Q8N138 153 aa16.79■□□□□ 0.28
SPTBN4-210ENST00000596900 HIST3H2BBQ8N257 126 aa16.79■□□□□ 0.28
SPTBN4-210ENST00000596900 PPBPP02775 128 aa16.78■□□□□ 0.28
SPTBN4-210ENST00000596900 RAB4AP20338 218 aa16.78■□□□□ 0.28
SPTBN4-210ENST00000596900 MRPL51Q4U2R6 128 aaKnown RBP16.78■□□□□ 0.28
SPTBN4-210ENST00000596900 GOLT1BQ9Y3E0 138 aa16.78■□□□□ 0.28
SPTBN4-210ENST00000596900 NOTCH3Q9UM47 2321 aa16.78■□□□□ 0.28
SPTBN4-210ENST00000596900 D6R8Y8 96 aa16.77■□□□□ 0.27
SPTBN4-210ENST00000596900 CKS2P33552 79 aa16.77■□□□□ 0.27
SPTBN4-210ENST00000596900 PDZD11Q5EBL8 140 aa16.77■□□□□ 0.27
SPTBN4-210ENST00000596900 DPH3P1Q9H4G8 78 aa16.77■□□□□ 0.27
SPTBN4-210ENST00000596900 C1orf158Q8N1D5 194 aa16.76■□□□□ 0.27
SPTBN4-210ENST00000596900 RNF185Q96GF1 192 aa16.76■□□□□ 0.27
SPTBN4-210ENST00000596900 U3KQK5 164 aa16.76■□□□□ 0.27
SPTBN4-210ENST00000596900 SPRY2O43597 315 aa16.76■□□□□ 0.27
SPTBN4-210ENST00000596900 MUC4Q99102 2169 aa16.75■□□□□ 0.27
SPTBN4-210ENST00000596900 IGHV3OR16-12A0A075B7B8 117 aa16.75■□□□□ 0.27
SPTBN4-210ENST00000596900 SERF1AO75920 110 aa16.75■□□□□ 0.27
SPTBN4-210ENST00000596900 SMIM17P0DL12 118 aa16.75■□□□□ 0.27
SPTBN4-210ENST00000596900 PRELID3AQ96N28 172 aa16.75■□□□□ 0.27
SPTBN4-210ENST00000596900 AKR1D1P51857 326 aa16.74■□□□□ 0.27
SPTBN4-210ENST00000596900 CSTL1Q9H114 145 aa16.74■□□□□ 0.27
SPTBN4-210ENST00000596900 GIG44P09565 113 aaPredicted RBP16.73■□□□□ 0.27
SPTBN4-210ENST00000596900 ESDP10768 282 aa16.73■□□□□ 0.27
SPTBN4-210ENST00000596900 IQCJQ1A5X6 159 aa16.73■□□□□ 0.27
SPTBN4-210ENST00000596900 ZMAT5Q9UDW3 170 aaKnown RBP16.73■□□□□ 0.27
SPTBN4-210ENST00000596900 LAMTOR2Q9Y2Q5 125 aa16.73■□□□□ 0.27
SPTBN4-210ENST00000596900 C14orf178Q8N769 122 aaPredicted RBP16.73■□□□□ 0.27
SPTBN4-210ENST00000596900 ZNF876PQ49A33 203 aa16.72■□□□□ 0.27
SPTBN4-210ENST00000596900 TMEM18Q96B42 140 aa16.72■□□□□ 0.27
SPTBN4-210ENST00000596900 RCHY1Q96PM5 261 aa16.72■□□□□ 0.27
SPTBN4-210ENST00000596900 SPXQ9BT56 116 aa16.72■□□□□ 0.27
SPTBN4-210ENST00000596900 MRAP2Q96G30 205 aa16.71■□□□□ 0.27
SPTBN4-210ENST00000596900 PIK3CD-AS1Q5SR53 167 aa16.71■□□□□ 0.27
SPTBN4-210ENST00000596900 M0R2P5 195 aa16.7■□□□□ 0.26
SPTBN4-210ENST00000596900 FABP4P15090 132 aa16.7■□□□□ 0.26
SPTBN4-210ENST00000596900 LINC00310P59036 64 aa16.7■□□□□ 0.26
SPTBN4-210ENST00000596900 C11orf72Q8NBR9 251 aa16.7■□□□□ 0.26
SPTBN4-210ENST00000596900 TMEM263Q8WUH6 116 aaKnown RBP16.7■□□□□ 0.26
SPTBN4-210ENST00000596900 GSN-AS1Q9NRJ2 163 aa16.7■□□□□ 0.26
SPTBN4-210ENST00000596900 OXLD1Q5BKU9 147 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 CSNK1G2-AS1Q8NCQ2 148 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 PTH2Q96A98 100 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 HIST1H2BLQ99880 126 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 STAB1Q9NY15 2570 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 IFITM10A6NMD0 228 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 NCR2O95944 276 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 MGPP08493 103 aa16.69■□□□□ 0.26
SPTBN4-210ENST00000596900 SMKR1H3BMG3 65 aa16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 NUPR1O60356 82 aa16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 HSBP1O75506 76 aa16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 PRM2P04554 102 aa16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 RNASEKQ6P5S7 137 aaKnown RBP16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 CHCHD1Q96BP2 118 aaKnown RBP16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 SAMD10Q9BYL1 202 aa16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 TRRAPQ9Y4A5 3859 aa16.68■□□□□ 0.26
SPTBN4-210ENST00000596900 KIR2DL5BA0A0G2JN68 375 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 KIR2DL5BA0A0G2JPC4 375 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 APOC4P55056 127 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 ZNF705AQ6ZN79 300 aaPredicted RBP16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 NIT1Q86X76 327 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 KIR2DL5AQ8N109 375 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 KIR2DL5BQ8NHK3 375 aa16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 RNASE8Q8TDE3 154 aaKnown RBP16.67■□□□□ 0.26
SPTBN4-210ENST00000596900 NPYP01303 97 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms