RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 SSTP61278 116 aa9.5□□□□□ -0.89
SHKBP1-209ENST00000595803 CACNG7P62955 275 aa9.5□□□□□ -0.89
SHKBP1-209ENST00000595803 COX19Q49B96 90 aa9.5□□□□□ -0.89
SHKBP1-209ENST00000595803 WDR73Q6P4I2 378 aa9.5□□□□□ -0.89
SHKBP1-209ENST00000595803 IGHV3-16A0A0C4DH30 117 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 MUC21A0A0G2JKD1 596 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 MUC21A0A140T8X8 626 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 A8MZ25 164 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 H3BVH4 76 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 OR5AL1P0C617 328 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 RPS10P46783 165 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 SPANXN1Q5VSR9 72 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 ATP5L2Q7Z4Y8 100 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 CSNK1G2-AS1Q8NCQ2 148 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 PHLDA3Q9Y5J5 127 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
SHKBP1-209ENST00000595803 A0A1B0GW15 77 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 C3orf84H3BNL1 204 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 SNAI2O43623 268 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 S100A8P05109 93 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 CTRLP40313 264 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 CAMPP49913 170 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 RAB4BP61018 213 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 TWIST1Q15672 202 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 RASL11AQ6T310 242 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
SHKBP1-209ENST00000595803 PRM2P04554 102 aa9.47□□□□□ -0.89
SHKBP1-209ENST00000595803 RNASE3P12724 160 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-209ENST00000595803 NTF3P20783 257 aa9.47□□□□□ -0.89
SHKBP1-209ENST00000595803 HBBP68871 147 aa9.47□□□□□ -0.89
SHKBP1-209ENST00000595803 ZNF415Q09FC8 603 aa9.47□□□□□ -0.89
SHKBP1-209ENST00000595803 LYSTQ99698 3801 aa9.47□□□□□ -0.89
SHKBP1-209ENST00000595803 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
SHKBP1-209ENST00000595803 AZU1P20160 251 aa9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 RRN3P1Q2M238 152 aa9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 DEFB121Q5J5C9 76 aa9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 SYT8Q8NBV8 401 aa9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 OR10AG1Q8NH19 301 aa9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 GNB1LQ9BYB4 327 aa9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 SCRT2Q9NQ03 307 aa9.46□□□□□ -0.9
SHKBP1-209ENST00000595803 STAB2Q8WWQ8 2551 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 IGHV4-4A0A075B6R2 117 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 SNURFLB1AK76 121 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 M0R381 172 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 SPRY2O43597 315 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 FRMD6-AS1P0C7T7 363 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 ZFP82Q8N141 532 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 RCHY1Q96PM5 261 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 B9D2Q9BPU9 175 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 SPXQ9BT56 116 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
SHKBP1-209ENST00000595803 DNAH1Q9P2D7 4330 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 LCE6AA0A183 80 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 MT-ND6P03923 174 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 FABP9Q0Z7S8 132 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 ZNF493Q6ZR52 646 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 TMEM136Q6ZRR5 245 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 Q6ZWC4 215 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 FRZBQ92765 325 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 CNFNQ9BYD5 112 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 MSRB1Q9NZV6 116 aa9.44□□□□□ -0.9
SHKBP1-209ENST00000595803 M0R2P5 195 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 HLA-DQA1P01909 254 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 TRGC2P03986 189 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 TRGC1P0CF51 173 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 DEFB135Q30KP9 77 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 TMEM263Q8WUH6 116 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 MRPL18Q9H0U6 180 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-209ENST00000595803 C1orf196B1AJZ1 125 aa9.42□□□□□ -0.9
SHKBP1-209ENST00000595803 APCSP02743 223 aa9.42□□□□□ -0.9
SHKBP1-209ENST00000595803 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
SHKBP1-209ENST00000595803 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
SHKBP1-209ENST00000595803 OR11H2Q8NH07 326 aa9.42□□□□□ -0.9
SHKBP1-209ENST00000595803 PTH2Q96A98 100 aa9.42□□□□□ -0.9
SHKBP1-209ENST00000595803 RNF183Q96D59 192 aa9.42□□□□□ -0.9
SHKBP1-209ENST00000595803 ZNF876PQ49A33 203 aa9.41□□□□□ -0.9
SHKBP1-209ENST00000595803 RNASE8Q8TDE3 154 aaKnown RBP9.41□□□□□ -0.9
SHKBP1-209ENST00000595803 TMEM191AQ9H0A3 160 aa9.41□□□□□ -0.9
SHKBP1-209ENST00000595803 U3KQK5 164 aa9.41□□□□□ -0.9
SHKBP1-209ENST00000595803 NXPH4O95158 308 aa9.4□□□□□ -0.9
SHKBP1-209ENST00000595803 SMIM17P0DL12 118 aa9.4□□□□□ -0.9
SHKBP1-209ENST00000595803 X6R8D5 127 aa9.4□□□□□ -0.9
SHKBP1-209ENST00000595803 EVI2AP22794 236 aa9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 DAZ2Q13117 558 aaKnown RBP9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 FAM104BQ5XKR9 115 aa9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 AP1S3Q96PC3 154 aa9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 DPH3P1Q9H4G8 78 aa9.39□□□□□ -0.91
SHKBP1-209ENST00000595803 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms