RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 KLK9Q9UKQ9 250 aa12.46□□□□□ -0.41
SIN3B-206ENST00000595541 GNRH2O43555 120 aa12.46□□□□□ -0.42
SIN3B-206ENST00000595541 C1orf122Q6ZSJ8 110 aa12.46□□□□□ -0.42
SIN3B-206ENST00000595541 ITLN2Q8WWU7 325 aaPredicted RBP12.46□□□□□ -0.42
SIN3B-206ENST00000595541 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.42
SIN3B-206ENST00000595541 DUSP14O95147 198 aaKnown RBP12.45□□□□□ -0.42
SIN3B-206ENST00000595541 APOMO95445 188 aa12.45□□□□□ -0.42
SIN3B-206ENST00000595541 TSHBP01222 138 aa12.45□□□□□ -0.42
SIN3B-206ENST00000595541 F6UB75 175 aa12.45□□□□□ -0.42
SIN3B-206ENST00000595541 MGPP08493 103 aa12.45□□□□□ -0.42
SIN3B-206ENST00000595541 FOXI1Q12951 378 aa12.45□□□□□ -0.42
SIN3B-206ENST00000595541 ANXA2RQ3ZCQ2 193 aa12.45□□□□□ -0.42
SIN3B-206ENST00000595541 UNQ9165/PRO28630Q6UXU0 137 aa12.45□□□□□ -0.42
SIN3B-206ENST00000595541 CCL21O00585 134 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 TSPAN13O95857 204 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 TRBV12-3P01733 135 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 UBE2D1P51668 147 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 CDIP1Q9H305 208 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 HIF1ANQ9NWT6 349 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 MAP1AP78559 2803 aaPredicted RBP12.44□□□□□ -0.42
SIN3B-206ENST00000595541 SAA4P35542 130 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 EEF1AKMT3Q96AZ1 226 aa12.44□□□□□ -0.42
SIN3B-206ENST00000595541 CENPVL3A0A0U1RRI6 287 aa12.43□□□□□ -0.42
SIN3B-206ENST00000595541 A0A1W2PPR1 153 aa12.43□□□□□ -0.42
SIN3B-206ENST00000595541 CD7P09564 240 aa12.43□□□□□ -0.42
SIN3B-206ENST00000595541 DPH3P1Q9H4G8 78 aa12.43□□□□□ -0.42
SIN3B-206ENST00000595541 SCGB1D4Q6XE38 83 aa12.43□□□□□ -0.42
SIN3B-206ENST00000595541 TMEM219Q86XT9 240 aa12.43□□□□□ -0.42
SIN3B-206ENST00000595541 SYT8Q8NBV8 401 aa12.43□□□□□ -0.42
SIN3B-206ENST00000595541 LOC107984156A0A0G2JMH3 177 aa12.42□□□□□ -0.42
SIN3B-206ENST00000595541 C11orf86A6NJI1 115 aa12.42□□□□□ -0.42
SIN3B-206ENST00000595541 S100A4P26447 101 aaKnown RBP12.42□□□□□ -0.42
SIN3B-206ENST00000595541 PSMB2P49721 201 aa12.42□□□□□ -0.42
SIN3B-206ENST00000595541 ARL17AQ8IVW1 177 aa12.42□□□□□ -0.42
SIN3B-206ENST00000595541 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
SIN3B-206ENST00000595541 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
SIN3B-206ENST00000595541 SRSF9Q13242 221 aaKnown RBP eCLIP12.42□□□□□ -0.42
SIN3B-206ENST00000595541 TMEM95Q3KNT9 176 aa12.42□□□□□ -0.42
SIN3B-206ENST00000595541 Q6ZS46 218 aa12.42□□□□□ -0.42
SIN3B-206ENST00000595541 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
SIN3B-206ENST00000595541 ZNF418Q8TF45 676 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-206ENST00000595541 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
SIN3B-206ENST00000595541 JPT2Q9H910 190 aa12.41□□□□□ -0.42
SIN3B-206ENST00000595541 SPTAN1Q13813 2472 aaKnown RBP12.41□□□□□ -0.42
SIN3B-206ENST00000595541 FBXL19-AS1Q494R0 122 aa12.41□□□□□ -0.42
SIN3B-206ENST00000595541 GEMIN7Q9H840 131 aaKnown RBP12.41□□□□□ -0.42
SIN3B-206ENST00000595541 TRBV7-1A0A0A6YYK4 115 aa12.41□□□□□ -0.42
SIN3B-206ENST00000595541 RNASE4P34096 147 aaKnown RBP12.41□□□□□ -0.42
SIN3B-206ENST00000595541 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
SIN3B-206ENST00000595541 DLX4Q92988 240 aaPredicted RBP12.41□□□□□ -0.42
SIN3B-206ENST00000595541 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
SIN3B-206ENST00000595541 IGKV3-7A0A075B6H7 116 aa12.4□□□□□ -0.42
SIN3B-206ENST00000595541 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
SIN3B-206ENST00000595541 LINC00315P59091 139 aa12.4□□□□□ -0.43
SIN3B-206ENST00000595541 COL6A6A6NMZ7 2263 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 A0A0J9YY99 117 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 SOCS3O14543 225 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 ASIPP42127 132 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 UBE2E1P51965 193 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 UBE2D3P61077 147 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 UBE2D2P62837 147 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 TGFAP01135 160 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 MT-ATP8P03928 68 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 ADORA2A-AS1P86434 159 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 C9orf139Q6ZV77 190 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 C5orf56Q8N8D9 126 aa12.39□□□□□ -0.43
SIN3B-206ENST00000595541 NDUFA11Q86Y39 141 aa12.38□□□□□ -0.43
SIN3B-206ENST00000595541 LINC00477Q96M19 166 aa12.38□□□□□ -0.43
SIN3B-206ENST00000595541 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
SIN3B-206ENST00000595541 ARL3P36405 182 aa12.38□□□□□ -0.43
SIN3B-206ENST00000595541 LENEPQ9Y5L5 61 aa12.38□□□□□ -0.43
SIN3B-206ENST00000595541 IGHV3OR16-10A0A075B7F0 116 aa12.37□□□□□ -0.43
SIN3B-206ENST00000595541 IGIPA6NJ69 53 aa12.37□□□□□ -0.43
SIN3B-206ENST00000595541 TCL1BO95988 128 aa12.37□□□□□ -0.43
SIN3B-206ENST00000595541 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
SIN3B-206ENST00000595541 IGF2RP11717 2491 aa12.37□□□□□ -0.43
SIN3B-206ENST00000595541 MUC6Q6W4X9 2439 aa12.37□□□□□ -0.43
SIN3B-206ENST00000595541 XGP55808 180 aa12.36□□□□□ -0.43
SIN3B-206ENST00000595541 TCF15Q12870 199 aa12.36□□□□□ -0.43
SIN3B-206ENST00000595541 OR10J6PQ8NGY7 276 aa12.36□□□□□ -0.43
SIN3B-206ENST00000595541 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
SIN3B-206ENST00000595541 CFC1BP0CG36 223 aa12.36□□□□□ -0.43
SIN3B-206ENST00000595541 CFC1P0CG37 223 aa12.36□□□□□ -0.43
SIN3B-206ENST00000595541 ZNRF2Q8NHG8 242 aa12.36□□□□□ -0.43
SIN3B-206ENST00000595541 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 CRYBG3Q68DQ2 2970 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 TRAV41A0A0B4J266 112 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 IGHV3-30P01768 117 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 IGHV3-30-5P0DP03 117 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 EDN2P20800 178 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
SIN3B-206ENST00000595541 C19orf54Q5BKX5 351 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 TCTEX1D4Q5JR98 221 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 ATP6V0E2Q8NHE4 81 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 AMELXQ99217 191 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 SS18L2Q9UHA2 77 aa12.35□□□□□ -0.43
SIN3B-206ENST00000595541 A0A087WWL8 130 aa12.34□□□□□ -0.43
SIN3B-206ENST00000595541 EIF4EBP3O60516 100 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms