RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MAPKAPK5-AS1Q8N8E1 139 aa11.82□□□□□ -0.52
PNKP-204ENST00000594661 LINC01356Q8N9X3 169 aa11.82□□□□□ -0.52
PNKP-204ENST00000594661 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
PNKP-204ENST00000594661 C21orf62Q9NYP8 219 aa11.82□□□□□ -0.52
PNKP-204ENST00000594661 MOB4Q9Y3A3 225 aa11.82□□□□□ -0.52
PNKP-204ENST00000594661 IGHV3-23P01764 117 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 GTSCR1Q86UQ5 136 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
PNKP-204ENST00000594661 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 RNF223E7ERA6 249 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 G3V318 75 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 DPM2O94777 84 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 ZC2HC1BQ5TFG8 222 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 ZANQ9Y493 2812 aa11.81□□□□□ -0.52
PNKP-204ENST00000594661 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
PNKP-204ENST00000594661 IGLV2-11P01706 119 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 LY6EQ16553 131 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 PTH2Q96A98 100 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 KIR2DL4Q99706 377 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 BEX4Q9NWD9 120 aaPredicted RBP11.8□□□□□ -0.52
PNKP-204ENST00000594661 AGRNO00468 2067 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 APCP25054 2843 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 H3BUX3 64 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 IFITM1P13164 125 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 PLA2G2AP14555 144 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 C17orf77Q96MU5 243 aa11.8□□□□□ -0.52
PNKP-204ENST00000594661 TRBV19A0A075B6N1 114 aa11.79□□□□□ -0.52
PNKP-204ENST00000594661 ASIPP42127 132 aa11.79□□□□□ -0.52
PNKP-204ENST00000594661 UBE2D3P61077 147 aa11.79□□□□□ -0.52
PNKP-204ENST00000594661 UBE2D2P62837 147 aa11.79□□□□□ -0.52
PNKP-204ENST00000594661 TWIST1Q15672 202 aa11.79□□□□□ -0.52
PNKP-204ENST00000594661 MRPL51Q4U2R6 128 aaKnown RBP11.79□□□□□ -0.52
PNKP-204ENST00000594661 SPXQ9BT56 116 aa11.79□□□□□ -0.52
PNKP-204ENST00000594661 NAV2Q8IVL1 2488 aa11.79□□□□□ -0.52
PNKP-204ENST00000594661 ATP5LO75964 103 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 ANXA2RQ3ZCQ2 193 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 HIST2H2BCQ6DN03 193 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 GOLT1AQ6ZVE7 132 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 WFDC3Q8IUB2 231 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 TRAV8-1A0A0A6YYK1 113 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 TGFAP01135 160 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 FCER1GP30273 86 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
PNKP-204ENST00000594661 A6NDX4 124 aa11.77□□□□□ -0.52
PNKP-204ENST00000594661 PSMB2P49721 201 aa11.77□□□□□ -0.52
PNKP-204ENST00000594661 TTC32Q5I0X7 151 aa11.77□□□□□ -0.52
PNKP-204ENST00000594661 CR1P17927 2039 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 TRBV20-1A0A075B6N2 111 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 MRPS12O15235 138 aaKnown RBP11.77□□□□□ -0.53
PNKP-204ENST00000594661 SCGB2A1O75556 95 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 NPYP01303 97 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 KLK9Q2XQG4 91 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 LYRM7Q5U5X0 104 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 SIGLEC15Q6ZMC9 328 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 PRNTQ86SH4 94 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 LRRC75A-AS1Q8N1F1 130 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 LINC00527Q9UJ94 153 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 KLK9Q9UKQ9 250 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 DOPEY2Q9Y3R5 2298 aa11.77□□□□□ -0.53
PNKP-204ENST00000594661 SNCGO76070 127 aa11.76□□□□□ -0.53
PNKP-204ENST00000594661 CTSGP08311 255 aa11.76□□□□□ -0.53
PNKP-204ENST00000594661 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
PNKP-204ENST00000594661 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
PNKP-204ENST00000594661 MYMXA0A1B0GTQ4 84 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 A8MWV9 139 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 J3QKU1 62 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 PRSS1P07477 247 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 IGHV4-31P0DP07 118 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 LYPD1Q8N2G4 141 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 TMEM190Q8WZ59 177 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 PPDPFQ9H3Y8 114 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 M0QXV9 152 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 C19orf54Q5BKX5 351 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 FAM159AQ6UWV7 190 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 FOXC2Q99958 501 aa11.75□□□□□ -0.53
PNKP-204ENST00000594661 CSPG4Q6UVK1 2322 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 TRAV41A0A0B4J266 112 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 TRAV4A0A0B4J268 109 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 J3QLI3 93 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 PRB4P10163 310 aaPredicted RBP11.74□□□□□ -0.53
PNKP-204ENST00000594661 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 Q96MF0 132 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 MDFICQ9P1T7 246 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 ZNF469Q96JG9 3925 aaPredicted RBP11.74□□□□□ -0.53
PNKP-204ENST00000594661 IGHV3-35A0A0C4DH35 117 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 TMEM213A2RRL7 107 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 CKS2P33552 79 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 LEPP41159 167 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 UBE2D1P51668 147 aa11.74□□□□□ -0.53
PNKP-204ENST00000594661 CRIP2P52943 208 aaPredicted RBP11.74□□□□□ -0.53
PNKP-204ENST00000594661 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
PNKP-204ENST00000594661 C5orf47Q569G3 176 aa11.73□□□□□ -0.53
PNKP-204ENST00000594661 ZFP2Q6ZN57 461 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms