RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-215	ENST00000592410	DLX4	Q92988	240 aa	Predicted RBP	4.24	□□□□□ -1.73
ERCC1-215	ENST00000592410	MRAP2	Q96G30	205 aa		4.24	□□□□□ -1.73
ERCC1-215	ENST00000592410	AP1S3	Q96PC3	154 aa		4.24	□□□□□ -1.73
ERCC1-215	ENST00000592410	MAP1LC3C	Q9BXW4	147 aa		4.24	□□□□□ -1.73
ERCC1-215	ENST00000592410	NBEAL1	Q6ZS30	2694 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	TRGV11	A0A075B6L2	103 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	SMIM17	P0DL12	118 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	CD28	P10747	220 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	HLA-DRB4	P13762	266 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	EDN2	P20800	178 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	SST	P61278	116 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	DEFB114	Q30KQ6	69 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	TDRG1	Q3Y452	100 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	PRR9	Q5T870	116 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	C18orf65	Q6ZTR6	163 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410		Q6ZWC4	215 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	FAM19A2	Q8N3H0	131 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	RAX2	Q96IS3	184 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	CLUHP3	Q96NS8	147 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	CITED2	Q99967	270 aa	Predicted RBP	4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	C20orf144	Q9BQM9	153 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	TMEM70	Q9BUB7	260 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	VAMP8	Q9BV40	100 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	DPH3P1	Q9H4G8	78 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	NXT2	Q9NPJ8	142 aa	Known RBP	4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	C11orf21	Q9P2W6	132 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	HLA-DRB4	X5D2U9	266 aa		4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	FLNA	P21333	2647 aa	Known RBP	4.23	□□□□□ -1.73
ERCC1-215	ENST00000592410	SVEP1	Q4LDE5	3571 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	IGHV1OR15-1	A0A075B7D0	117 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	TRAV12-3	A0A0B4J271	114 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	IGHV1-24	A0A0C4DH33	117 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410		K7EMI3	77 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410		M0R381	172 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	CD7	P09564	240 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	C3orf79	P0CE67	100 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	G0S2	P27469	103 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	DEFB131A	P59861	70 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	MUC21	Q5SSG8	566 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	PET117	Q6UWS5	81 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	ADAMTSL5	Q6ZMM2	481 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	TEX43	Q6ZNM6	134 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	ZNF575	Q86XF7	245 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	NDUFA11	Q86Y39	141 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	TMEM61	Q8N0U2	210 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	RNF185	Q96GF1	192 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	SCRT2	Q9NQ03	307 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	ANK3	Q12955	4377 aa	Known RBP	4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	CSMD2	Q7Z408	3487 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	PDZD2	O15018	2839 aa		4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	MAP1A	P78559	2803 aa	Predicted RBP	4.22	□□□□□ -1.73
ERCC1-215	ENST00000592410	CCDC168	Q8NDH2	2452 aa		4.21	□□□□□ -1.73
ERCC1-215	ENST00000592410	CSMD1	Q96PZ7	3565 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	NBPF19	A0A087WUL8	3843 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	MUC21	A0A0G2JKD1	596 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	MUC21	A0A140T8X8	626 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	LOC389332	A0A1B0GUA5	103 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410		A0A1W2PRX2	142 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	LINC01549	A6NIU2	74 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	PRSS47	A8MTI9	375 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410		A8MTW9	85 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	NXPH4	O95158	308 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	TNFRSF6B	O95407	300 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	IGKV3-20	P01619	116 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	HBD	P02042	147 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	EVI2A	P22794	236 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	IFI27	P40305	119 aa	Predicted RBP	4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	PROK1	P58294	105 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	DEFB1	P60022	68 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	NUTF2	P61970	127 aa	Known RBP	4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	SPINK13	Q1W4C9	94 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	CD300E	Q496F6	205 aa	Predicted RBP	4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	DEFB125	Q8N687	156 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410		Q8N8P6	123 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	C11orf44	Q8N8P7	122 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	URB1-AS1	Q96HZ7	61 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	DUX3	Q96PT4	197 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	C20orf78	Q9BR46	151 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	MAP6D1	Q9H9H5	199 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	MSRB1	Q9NZV6	116 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	SELENOK	Q9Y6D0	94 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	MTOR	P42345	2549 aa		4.21	□□□□□ -1.74
ERCC1-215	ENST00000592410	CELSR1	Q9NYQ6	3014 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	ZAN	Q9Y493	2812 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	KIR2DL5B	A0A0G2JN68	375 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	KIR2DL5B	A0A0G2JPC4	375 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	LINC01546	A6NGU7	62 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	OR11H12	B2RN74	326 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	HSBP1L1	C9JCN9	74 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410		H3BMM0	161 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	SYS1-DBNDD2	H3BUS1	97 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	CRX	O43186	299 aa	Predicted RBP	4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	GNRH2	O43555	120 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	NCR2	O95944	276 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	NPY	P01303	97 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	INS	P01308	110 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	RNASE3	P12724	160 aa	Known RBP	4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	DDT	P30046	118 aa		4.2	□□□□□ -1.74
ERCC1-215	ENST00000592410	KRTAP10-2	P60368	255 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms