RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 C9orf139Q6ZV77 190 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 SCGB3A1Q96QR1 104 aa8.25□□□□□ -1.09
VPS4B-206ENST00000591475 TRBV7-3A0A075B6L6 115 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 OR11H12B2RN74 326 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 SAA4P35542 130 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 PRR9Q5T870 116 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 OR11H1Q8NG94 326 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 OR11H2Q8NH07 326 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 HECTD1Q9ULT8 2610 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 MYMXA0A1B0GTQ4 84 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 LINC01548A6NM66 108 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 J3QR89 54 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 SUMO2P61956 95 aaKnown RBP8.24□□□□□ -1.09
VPS4B-206ENST00000591475 RRN3P1Q2M238 152 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 LINC00477Q96M19 166 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 ATP6V0BQ99437 205 aa8.24□□□□□ -1.09
VPS4B-206ENST00000591475 CENPVL3A0A0U1RRI6 287 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 WFDC2Q14508 124 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 Q5PR19 223 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 SAMD13Q5VXD3 122 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 NEXN-AS1Q8NBZ9 246 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 KLK15Q9H2R5 256 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 SPANXB1Q9NS25 103 aaPredicted RBP8.23□□□□□ -1.09
VPS4B-206ENST00000591475 ITPR2Q14571 2701 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 AGRNO00468 2067 aa8.23□□□□□ -1.09
VPS4B-206ENST00000591475 TRAV21A0A0B4J279 112 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 A0A1B0GWB2 263 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 M0R381 172 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 C5orf56Q8N8D9 126 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 OR10J6PQ8NGY7 276 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 RASL10AQ92737 203 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 BAHCC1Q9P281 2608 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 FAM223BA6NKX1 122 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 H3BMG7 143 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 J3KRW8 73 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 OVOL1O14753 267 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 S100A4P26447 101 aaKnown RBP8.22□□□□□ -1.09
VPS4B-206ENST00000591475 ASIPP42127 132 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 FAM223AQ8IWN6 122 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
VPS4B-206ENST00000591475 TRAV41A0A0B4J266 112 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 B4DSR2 109 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 NPFFO15130 113 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 IGF1P05019 195 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 MED14OSP0DP75 135 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 GAGE13Q4V321 117 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 ZFAND2AQ8N6M9 145 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 SIGMAR1Q99720 223 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 SVEP1Q4LDE5 3571 aa8.21□□□□□ -1.1
VPS4B-206ENST00000591475 A0A096LNT2 108 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 PPP1R17O96001 155 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 MSMBP08118 114 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 MGPP08493 103 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
VPS4B-206ENST00000591475 SCGB1A1P11684 91 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 ARL3P36405 182 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 CD300EQ496F6 205 aaPredicted RBP8.2□□□□□ -1.1
VPS4B-206ENST00000591475 C2orf66Q6UXQ4 117 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 C14orf178Q8N769 122 aaPredicted RBP8.2□□□□□ -1.1
VPS4B-206ENST00000591475 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 RPL39LQ96EH5 51 aaKnown RBP8.2□□□□□ -1.1
VPS4B-206ENST00000591475 MED13LQ71F56 2210 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 HOXA3O43365 443 aaPredicted RBP8.2□□□□□ -1.1
VPS4B-206ENST00000591475 AZU1P20160 251 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 SCGB2A2Q13296 93 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 CYSLTR1Q9Y271 337 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
VPS4B-206ENST00000591475 WNK2Q9Y3S1 2297 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 PDZD2O15018 2839 aa8.2□□□□□ -1.1
VPS4B-206ENST00000591475 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 RNF223E7ERA6 249 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 GATA3P23771 443 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 ANXA2RQ3ZCQ2 193 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 Q96MF0 132 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 MOB4Q9Y3A3 225 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 TMEM238LA0A1B0GVL6 79 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 PRSS29PA6NIE9 313 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 A6NJY4 79 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 SPRY2O43597 315 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 ETDBQ3ZM63 59 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 C19orf54Q5BKX5 351 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 AMTNQ6UX39 209 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 GPHB5Q86YW7 130 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 KRTAP1-3Q8IUG1 177 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 GTSF1LQ9H1H1 148 aa8.19□□□□□ -1.1
VPS4B-206ENST00000591475 ZNF815PA8K554 130 aa8.18□□□□□ -1.1
VPS4B-206ENST00000591475 NDUFA4O00483 81 aa8.18□□□□□ -1.1
VPS4B-206ENST00000591475 SOCS3O14543 225 aa8.18□□□□□ -1.1
VPS4B-206ENST00000591475 RNASE4P34096 147 aaKnown RBP8.18□□□□□ -1.1
VPS4B-206ENST00000591475 CRIP2P52943 208 aaPredicted RBP8.18□□□□□ -1.1
VPS4B-206ENST00000591475 MORN3Q6PF18 240 aaPredicted RBP8.18□□□□□ -1.1
VPS4B-206ENST00000591475 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
VPS4B-206ENST00000591475 TMEM219Q86XT9 240 aa8.18□□□□□ -1.1
VPS4B-206ENST00000591475 LINC01356Q8N9X3 169 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms