RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 XKRY2A2RUG3 117 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 HTN3P15516 51 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 ZNF876PQ49A33 203 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 DNLZQ5SXM8 178 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 C15orf54Q8N8G6 183 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 SFRP2Q96HF1 295 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 OSTCQ9NRP0 149 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 PHLDA3Q9Y5J5 127 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 LGALS9BQ3B8N2 356 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 OR10G8Q8NGN5 311 aa13.03□□□□□ -0.32
CROCCP3-205ENST00000591316 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.33
CROCCP3-205ENST00000591316 RASL10AQ92737 203 aa13.02□□□□□ -0.33
CROCCP3-205ENST00000591316 SEC11CQ9BY50 192 aa13.02□□□□□ -0.33
CROCCP3-205ENST00000591316 M0R381 172 aa13.01□□□□□ -0.33
CROCCP3-205ENST00000591316 IGHV3-53P01767 116 aa13.01□□□□□ -0.33
CROCCP3-205ENST00000591316 ZFAND6Q6FIF0 208 aa13.01□□□□□ -0.33
CROCCP3-205ENST00000591316 FER1L6-AS1Q8NA97 138 aa13.01□□□□□ -0.33
CROCCP3-205ENST00000591316 STAB2Q8WWQ8 2551 aa13.01□□□□□ -0.33
CROCCP3-205ENST00000591316 CXCL1P09341 107 aa13□□□□□ -0.33
CROCCP3-205ENST00000591316 LINC00612Q8N6U2 182 aa13□□□□□ -0.33
CROCCP3-205ENST00000591316 MUC7Q8TAX7 377 aa13□□□□□ -0.33
CROCCP3-205ENST00000591316 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
CROCCP3-205ENST00000591316 A8MWL6 223 aa12.99□□□□□ -0.33
CROCCP3-205ENST00000591316 PNRC1Q12796 327 aaPredicted RBP12.99□□□□□ -0.33
CROCCP3-205ENST00000591316 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
CROCCP3-205ENST00000591316 SCRT2Q9NQ03 307 aa12.99□□□□□ -0.33
CROCCP3-205ENST00000591316 V9GYV3 84 aa12.99□□□□□ -0.33
CROCCP3-205ENST00000591316 DEFB131BA0A096LNP1 70 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 SYT8Q8NBV8 401 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 OR10AG1Q8NH19 301 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 GTSF1Q8WW33 167 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 MUC4Q99102 2169 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 F5H768 121 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 SNAI2O43623 268 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 ATP5G1P05496 136 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 OR5AL1P0C617 328 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 IGLC6P0CF74 106 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 MED14OSP0DP75 135 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 JPT2Q9H910 190 aa12.98□□□□□ -0.33
CROCCP3-205ENST00000591316 TRAV10A0A0B4J240 114 aa12.97□□□□□ -0.33
CROCCP3-205ENST00000591316 A0A1W2PPQ1 181 aa12.97□□□□□ -0.33
CROCCP3-205ENST00000591316 RNF212Q495C1 297 aa12.97□□□□□ -0.33
CROCCP3-205ENST00000591316 POM121L12Q8N7R1 296 aa12.97□□□□□ -0.33
CROCCP3-205ENST00000591316 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
CROCCP3-205ENST00000591316 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
CROCCP3-205ENST00000591316 CT83Q5H943 113 aa12.96□□□□□ -0.33
CROCCP3-205ENST00000591316 ZFP82Q8N141 532 aa12.96□□□□□ -0.33
CROCCP3-205ENST00000591316 TSKUQ8WUA8 353 aa12.96□□□□□ -0.33
CROCCP3-205ENST00000591316 ZNF479Q96JC4 524 aa12.96□□□□□ -0.33
CROCCP3-205ENST00000591316 IGHV3-73A0A0B4J1V6 119 aa12.95□□□□□ -0.34
CROCCP3-205ENST00000591316 F2Z2F3 143 aa12.95□□□□□ -0.34
CROCCP3-205ENST00000591316 C10orf91Q5T1B1 145 aa12.95□□□□□ -0.34
CROCCP3-205ENST00000591316 PTH2Q96A98 100 aa12.95□□□□□ -0.34
CROCCP3-205ENST00000591316 MT-ND4LP03901 98 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 NDUFA5Q16718 116 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 C18orf15Q96N68 181 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 TRAV4A0A0B4J268 109 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 HIGD1CA8MV81 97 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 APOC3P02656 99 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 HOXA5P20719 270 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 NTF3P20783 257 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 CFAP126Q5VTH2 177 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 CEMP1Q6PRD7 247 aaPredicted RBP12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 SAMD10Q9BYL1 202 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 CARHSP1Q9Y2V2 147 aaKnown RBP12.94□□□□□ -0.34
CROCCP3-205ENST00000591316 TRGV4A0A0C4DH28 118 aa12.93□□□□□ -0.34
CROCCP3-205ENST00000591316 IGLL5B9A064 214 aa12.93□□□□□ -0.34
CROCCP3-205ENST00000591316 RS1O15537 224 aa12.93□□□□□ -0.34
CROCCP3-205ENST00000591316 TWIST1Q15672 202 aa12.93□□□□□ -0.34
CROCCP3-205ENST00000591316 ANAPC16Q96DE5 110 aa12.93□□□□□ -0.34
CROCCP3-205ENST00000591316 A0A087WWL8 130 aa12.92□□□□□ -0.34
CROCCP3-205ENST00000591316 A8MWV9 139 aa12.92□□□□□ -0.34
CROCCP3-205ENST00000591316 PPP1R2P9O14990 202 aa12.92□□□□□ -0.34
CROCCP3-205ENST00000591316 FOXA3P55318 350 aaPredicted RBP12.92□□□□□ -0.34
CROCCP3-205ENST00000591316 CACNG7P62955 275 aa12.92□□□□□ -0.34
CROCCP3-205ENST00000591316 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
CROCCP3-205ENST00000591316 GFRA4Q9GZZ7 299 aa12.92□□□□□ -0.34
CROCCP3-205ENST00000591316 NUPR2A6NF83 97 aa12.91□□□□□ -0.34
CROCCP3-205ENST00000591316 FHL2Q14192 279 aa12.91□□□□□ -0.34
CROCCP3-205ENST00000591316 PIK3CD-AS1Q5SR53 167 aa12.91□□□□□ -0.34
CROCCP3-205ENST00000591316 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
CROCCP3-205ENST00000591316 A0A0J9YY99 117 aa12.9□□□□□ -0.34
CROCCP3-205ENST00000591316 CTRLP40313 264 aa12.9□□□□□ -0.34
CROCCP3-205ENST00000591316 C14orf178Q8N769 122 aaPredicted RBP12.9□□□□□ -0.34
CROCCP3-205ENST00000591316 NDUFAF3Q9BU61 184 aa12.9□□□□□ -0.34
CROCCP3-205ENST00000591316 NAT8BQ9UHF3 227 aa12.9□□□□□ -0.34
CROCCP3-205ENST00000591316 DNAH7Q8WXX0 4024 aa12.9□□□□□ -0.34
CROCCP3-205ENST00000591316 SMIM27A0A1W2PRY6 76 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 FAM231BA6NCW3 169 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 C3orf84H3BNL1 204 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 NXPH4O95158 308 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 CASC10Q5T4H9 136 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 CLRN3Q8NCR9 226 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 BORCS7Q96B45 105 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 HHLA3Q9XRX5 114 aa12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 KLK5Q9Y337 293 aaPredicted RBP12.9□□□□□ -0.35
CROCCP3-205ENST00000591316 TRAV26-1A0A087WT03 109 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms