RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 PGLYRP4Q96LB8 373 aa12.31□□□□□ -0.44
RPRD1A-209ENST00000590898 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
RPRD1A-209ENST00000590898 ZNF493Q6ZR52 646 aa12.31□□□□□ -0.44
RPRD1A-209ENST00000590898 TRAPPC1Q9Y5R8 145 aa12.31□□□□□ -0.44
RPRD1A-209ENST00000590898 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
RPRD1A-209ENST00000590898 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
RPRD1A-209ENST00000590898 ZNF575Q86XF7 245 aa12.3□□□□□ -0.44
RPRD1A-209ENST00000590898 TMEM189A5PLL7 270 aa12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 KCNS1Q96KK3 526 aa12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 C11orf68Q9H3H3 251 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 IGHV4-28A0A0C4DH34 117 aa12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 SNURFLB1AK76 121 aa12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 SNRPEP62304 92 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-209ENST00000590898 HTN1P15515 57 aa12.28□□□□□ -0.44
RPRD1A-209ENST00000590898 TMEM136Q6ZRR5 245 aa12.28□□□□□ -0.44
RPRD1A-209ENST00000590898 GFRA4Q9GZZ7 299 aa12.28□□□□□ -0.44
RPRD1A-209ENST00000590898 AZU1P20160 251 aa12.27□□□□□ -0.44
RPRD1A-209ENST00000590898 RNASE8Q8TDE3 154 aaKnown RBP12.27□□□□□ -0.44
RPRD1A-209ENST00000590898 C16orf74Q96GX8 76 aa12.27□□□□□ -0.44
RPRD1A-209ENST00000590898 MRPL18Q9H0U6 180 aaKnown RBP12.27□□□□□ -0.44
RPRD1A-209ENST00000590898 ORM1P02763 201 aa12.27□□□□□ -0.45
RPRD1A-209ENST00000590898 PRM2P04554 102 aa12.27□□□□□ -0.45
RPRD1A-209ENST00000590898 CAMPP49913 170 aa12.27□□□□□ -0.45
RPRD1A-209ENST00000590898 RAB4BP61018 213 aa12.27□□□□□ -0.45
RPRD1A-209ENST00000590898 TPPP3Q9BW30 176 aa12.27□□□□□ -0.45
RPRD1A-209ENST00000590898 A0A1B0GXF2 115 aa12.26□□□□□ -0.45
RPRD1A-209ENST00000590898 CBY3A6NI87 242 aa12.26□□□□□ -0.45
RPRD1A-209ENST00000590898 S100A6P06703 90 aa12.26□□□□□ -0.45
RPRD1A-209ENST00000590898 NDUFA6P56556 154 aa12.26□□□□□ -0.45
RPRD1A-209ENST00000590898 MUC21Q5SSG8 566 aa12.26□□□□□ -0.45
RPRD1A-209ENST00000590898 IGKV3D-20A0A0C4DH25 116 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 C5orf52A6NGY3 159 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 ARMS2P0C7Q2 107 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 TP53TG3Q9ULZ0 132 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 A0A0J9YWU9 116 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 FOXA3P55318 350 aaPredicted RBP12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 SSTP61278 116 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 EDA2RQ9HAV5 297 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
RPRD1A-209ENST00000590898 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
RPRD1A-209ENST00000590898 PLAC8L1A1L4L8 177 aa12.24□□□□□ -0.45
RPRD1A-209ENST00000590898 SLAQ13239 276 aa12.24□□□□□ -0.45
RPRD1A-209ENST00000590898 KIAA1644Q3SXP7 199 aa12.24□□□□□ -0.45
RPRD1A-209ENST00000590898 LINC01559Q495D7 138 aa12.24□□□□□ -0.45
RPRD1A-209ENST00000590898 TIMM8BQ9Y5J9 83 aaPredicted RBP12.23□□□□□ -0.45
RPRD1A-209ENST00000590898 DEFB4AO15263 64 aa12.23□□□□□ -0.45
RPRD1A-209ENST00000590898 DAZ2Q13117 558 aaKnown RBP12.23□□□□□ -0.45
RPRD1A-209ENST00000590898 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
RPRD1A-209ENST00000590898 LYZL1Q6UWQ5 148 aa12.23□□□□□ -0.45
RPRD1A-209ENST00000590898 ATP5L2Q7Z4Y8 100 aa12.23□□□□□ -0.45
RPRD1A-209ENST00000590898 C11orf72Q8NBR9 251 aa12.23□□□□□ -0.45
RPRD1A-209ENST00000590898 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
RPRD1A-209ENST00000590898 GNRH2O43555 120 aa12.22□□□□□ -0.45
RPRD1A-209ENST00000590898 HBBP68871 147 aa12.22□□□□□ -0.45
RPRD1A-209ENST00000590898 DNLZQ5SXM8 178 aa12.21□□□□□ -0.45
RPRD1A-209ENST00000590898 DKK2Q9UBU2 259 aa12.21□□□□□ -0.45
RPRD1A-209ENST00000590898 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 A0A1B0GUT8 65 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 XKRY2A2RUG3 117 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 LYRM9A8MSI8 78 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 HLA-DQA1P01909 254 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 MT-ND6P03923 174 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 IGLC6P0CF74 106 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 SPART-AS1P0CW21 52 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 EMP1P54849 157 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 ZNF415Q09FC8 603 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 RASL11AQ6T310 242 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 SPXQ9BT56 116 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 MDFICQ9P1T7 246 aa12.21□□□□□ -0.46
RPRD1A-209ENST00000590898 FER1L6-AS1Q8NA97 138 aa12.2□□□□□ -0.46
RPRD1A-209ENST00000590898 IL17DQ8TAD2 202 aa12.2□□□□□ -0.46
RPRD1A-209ENST00000590898 RPS20P60866 119 aaKnown RBP12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 PDZD11Q5EBL8 140 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 DNAH7Q8WXX0 4024 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 MUC4Q99102 2169 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 APCSP02743 223 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 CTRLP40313 264 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 COX19Q49B96 90 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 C11orf45Q8TAV5 145 aa12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 NOP10Q9NPE3 64 aaKnown RBP12.19□□□□□ -0.46
RPRD1A-209ENST00000590898 IFITM10A6NMD0 228 aa12.18□□□□□ -0.46
RPRD1A-209ENST00000590898 F2Z2F3 143 aa12.18□□□□□ -0.46
RPRD1A-209ENST00000590898 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
RPRD1A-209ENST00000590898 HOXA5P20719 270 aa12.17□□□□□ -0.46
RPRD1A-209ENST00000590898 ASIPP42127 132 aa12.17□□□□□ -0.46
RPRD1A-209ENST00000590898 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
RPRD1A-209ENST00000590898 S100A4P26447 101 aaKnown RBP12.17□□□□□ -0.46
RPRD1A-209ENST00000590898 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
RPRD1A-209ENST00000590898 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms