RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 NACAE9PAV3 2078 aa5.65□□□□□ -1.51
SMAD4-209ENST00000589941 GAGE10A6NGK3 116 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 K7EP13 123 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 IGLV2-23P01705 113 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 APOA2P02652 100 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 IGKV1-16P04430 117 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 HIST1H1EP10412 219 aaKnown RBP5.64□□□□□ -1.51
SMAD4-209ENST00000589941 HNRNPA3P51991 378 aaKnown RBP5.64□□□□□ -1.51
SMAD4-209ENST00000589941 ERHP84090 104 aaKnown RBP5.64□□□□□ -1.51
SMAD4-209ENST00000589941 NDPQ00604 133 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 EBI3Q14213 229 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 FXYD3Q14802 87 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 MRGPRG-AS1Q2M3A8 158 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 DEFB135Q30KP9 77 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 KIAA1644Q3SXP7 199 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 MRPL54Q6P161 138 aaKnown RBP5.64□□□□□ -1.51
SMAD4-209ENST00000589941 EBLN2Q6P2I7 272 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 NUP35Q8NFH5 326 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 OR2D3Q8NGH3 330 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 VSTM2AQ8TAG5 236 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 CHCHD1Q96BP2 118 aaKnown RBP5.64□□□□□ -1.51
SMAD4-209ENST00000589941 TRGV9Q99603 122 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 PAXXQ9BUH6 204 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 FNDC4Q9H6D8 234 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-209ENST00000589941 SELENOKQ9Y6D0 94 aa5.64□□□□□ -1.51
SMAD4-209ENST00000589941 IGLC7A0M8Q6 106 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 OR11H12B2RN74 326 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 HLA-DRB1P01911 266 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 CSN3P07498 182 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 OR5AL1P0C617 328 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 PMCHP20382 165 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 GATA2P23769 480 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-209ENST00000589941 GNG10P50151 68 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 FOXA3P55318 350 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-209ENST00000589941 TCL1AP56279 114 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 UBE2G1P62253 170 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 RPL8P62917 257 aaKnown RBP5.63□□□□□ -1.51
SMAD4-209ENST00000589941 WT1-ASQ06250 92 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 TNXAQ16473 311 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 C10orf113Q5VZT2 155 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 LCN12Q6JVE5 192 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 Q6ZN92 141 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 OR10X1Q8NGY0 326 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 BORCS7Q96B45 105 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 MRPL20Q9BYC9 149 aaKnown RBP5.63□□□□□ -1.51
SMAD4-209ENST00000589941 GAL3ST2Q9H3Q3 398 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 ST20Q9HBF5 79 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 ZNF355PQ9NSJ1 428 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 EPDR1Q9UM22 224 aa5.63□□□□□ -1.51
SMAD4-209ENST00000589941 TRAV5A0A0B4J249 113 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 IGHV1-3A0A0C4DH29 117 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 EPM2AB3EWF7 344 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 COX7A2P2O60397 106 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 LTAP01374 205 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 APOHP02749 345 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-209ENST00000589941 CRYGBP07316 175 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 MGST1P10620 155 aaKnown RBP5.62□□□□□ -1.51
SMAD4-209ENST00000589941 SUB1P53999 127 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMAD4-209ENST00000589941 MFAP2P55001 183 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 HBBP68871 147 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 ECSCRQ19T08 205 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 TMEM116Q8NCL8 245 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 OR10W1Q8NGF6 305 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 RNF125Q96EQ8 232 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 FMC1Q96HJ9 113 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 HARBI1Q96MB7 349 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 GPR82Q96P67 336 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 TXN2Q99757 166 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 RASL11BQ9BPW5 248 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 FAM103A1Q9BTL3 118 aaKnown RBP5.62□□□□□ -1.51
SMAD4-209ENST00000589941 RPP21Q9H633 154 aaKnown RBP5.62□□□□□ -1.51
SMAD4-209ENST00000589941 TMEM14CQ9P0S9 112 aa5.62□□□□□ -1.51
SMAD4-209ENST00000589941 TRAV41A0A0B4J266 112 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 A8MWL6 223 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 E7EUB6 86 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 HSBP1O75506 76 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 CA1P00915 261 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-209ENST00000589941 PYYP10082 97 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 TFPI2P48307 235 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 SYNJ2BPP57105 145 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 RHOGP84095 191 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 UBE2V1Q13404 147 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 ETFRF1Q6IPR1 90 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 SPATA12Q7Z6I5 190 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 FAM19A2Q8N3H0 131 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 C5orf17Q8NAS9 161 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 OR9G4Q8NGQ1 327 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 FLYWCH2Q96CP2 140 aaKnown RBP5.61□□□□□ -1.51
SMAD4-209ENST00000589941 NDFIP1Q9BT67 221 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 TMEM70Q9BUB7 260 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 HINT2Q9BX68 163 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 MRPL36Q9P0J6 103 aaKnown RBP5.61□□□□□ -1.51
SMAD4-209ENST00000589941 WASHC3Q9Y3C0 194 aa5.61□□□□□ -1.51
SMAD4-209ENST00000589941 IGHV7-81A0A0B4J1V7 117 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 HIGD1CA8MV81 97 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 IGLL5B9A064 214 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 M0R2Z0 102 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 CORTO00230 105 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 CCL25O15444 150 aa5.6□□□□□ -1.51
SMAD4-209ENST00000589941 SPINK4O60575 86 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms