RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 HLA-DQA1P01909 254 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 TWIST1Q15672 202 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 CSNK1G2-AS1Q8NCQ2 148 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 FRZBQ92765 325 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 MDFICQ9P1T7 246 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 GOLT1BQ9Y3E0 138 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 PHLDA3Q9Y5J5 127 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 CACNG7P62955 275 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 FABP9Q0Z7S8 132 aa12.69□□□□□ -0.38
CXXC1-212ENST00000589940 IGHV4-4A0A075B6R2 117 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 PHOX2AO14813 284 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 SPANXN1Q5VSR9 72 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 C9orf85Q96MD7 179 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 MRPL18Q9H0U6 180 aaKnown RBP12.68□□□□□ -0.38
CXXC1-212ENST00000589940 NBEAL1Q6ZS30 2694 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 IGHV3OR16-12A0A075B7B8 117 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 KIR2DL5BA0A0G2JN68 375 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 KIR2DL5BA0A0G2JPC4 375 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 S100A12P80511 92 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 KIR2DL5AQ8N109 375 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 GATD1Q8NB37 220 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 KIR2DL5BQ8NHK3 375 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
CXXC1-212ENST00000589940 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
CXXC1-212ENST00000589940 MGAM2Q2M2H8 2515 aa12.67□□□□□ -0.38
CXXC1-212ENST00000589940 PRM2P04554 102 aa12.67□□□□□ -0.38
CXXC1-212ENST00000589940 LINC00469Q8N7U9 141 aa12.67□□□□□ -0.38
CXXC1-212ENST00000589940 APOC4P55056 127 aa12.66□□□□□ -0.38
CXXC1-212ENST00000589940 ZNF493Q6ZR52 646 aa12.66□□□□□ -0.38
CXXC1-212ENST00000589940 SPRY2O43597 315 aa12.66□□□□□ -0.38
CXXC1-212ENST00000589940 RAB5BP61020 215 aa12.66□□□□□ -0.38
CXXC1-212ENST00000589940 ZNF705AQ6ZN79 300 aaPredicted RBP12.66□□□□□ -0.38
CXXC1-212ENST00000589940 M0R381 172 aa12.65□□□□□ -0.38
CXXC1-212ENST00000589940 NXPH4O95158 308 aa12.65□□□□□ -0.38
CXXC1-212ENST00000589940 APCSP02743 223 aa12.65□□□□□ -0.38
CXXC1-212ENST00000589940 SLAQ13239 276 aa12.65□□□□□ -0.38
CXXC1-212ENST00000589940 ZNF415Q09FC8 603 aa12.65□□□□□ -0.38
CXXC1-212ENST00000589940 ZFP82Q8N141 532 aa12.65□□□□□ -0.38
CXXC1-212ENST00000589940 C12orf57Q99622 126 aa12.65□□□□□ -0.38
CXXC1-212ENST00000589940 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
CXXC1-212ENST00000589940 C11orf72Q8NBR9 251 aa12.64□□□□□ -0.39
CXXC1-212ENST00000589940 TMEM191AQ9H0A3 160 aa12.64□□□□□ -0.39
CXXC1-212ENST00000589940 A8MZ25 164 aa12.63□□□□□ -0.39
CXXC1-212ENST00000589940 AZU1P20160 251 aa12.63□□□□□ -0.39
CXXC1-212ENST00000589940 AKR1D1P51857 326 aa12.63□□□□□ -0.39
CXXC1-212ENST00000589940 TRGC1P0CF51 173 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 GSN-AS1Q9NRJ2 163 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 MUC4Q99102 2169 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BKO60814 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BJP06899 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BOP23527 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BBP33778 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BDP58876 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BCP62807 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST2H2BEQ16778 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.62□□□□□ -0.39
CXXC1-212ENST00000589940 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 SYT8Q8NBV8 401 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
CXXC1-212ENST00000589940 TMEM263Q8WUH6 116 aaKnown RBP12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BHQ93079 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BNQ99877 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 HIST1H2BMQ99879 126 aa12.62□□□□□ -0.39
CXXC1-212ENST00000589940 KIAA1644Q3SXP7 199 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 FAM104BQ5XKR9 115 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 RCHY1Q96PM5 261 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 NBEAL2Q6ZNJ1 2754 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 DNHD1Q96M86 4753 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 UBE2CO00762 179 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 EVI2AP22794 236 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 KRTAP21-3Q3LHN1 58 aa12.61□□□□□ -0.39
CXXC1-212ENST00000589940 RRN3P1Q2M238 152 aa12.6□□□□□ -0.39
CXXC1-212ENST00000589940 AMN1Q8IY45 258 aa12.6□□□□□ -0.39
CXXC1-212ENST00000589940 AP1S3Q96PC3 154 aa12.6□□□□□ -0.39
CXXC1-212ENST00000589940 SPXQ9BT56 116 aa12.6□□□□□ -0.39
CXXC1-212ENST00000589940 ZNF876PQ49A33 203 aa12.6□□□□□ -0.39
CXXC1-212ENST00000589940 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
CXXC1-212ENST00000589940 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
CXXC1-212ENST00000589940 M0R2P5 195 aa12.59□□□□□ -0.39
CXXC1-212ENST00000589940 DEFB135Q30KP9 77 aa12.59□□□□□ -0.39
CXXC1-212ENST00000589940 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
CXXC1-212ENST00000589940 PTH2Q96A98 100 aa12.58□□□□□ -0.39
CXXC1-212ENST00000589940 SRIP30626 198 aa12.57□□□□□ -0.4
CXXC1-212ENST00000589940 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
CXXC1-212ENST00000589940 Q6ZWC4 215 aa12.57□□□□□ -0.4
CXXC1-212ENST00000589940 C14orf178Q8N769 122 aaPredicted RBP12.57□□□□□ -0.4
CXXC1-212ENST00000589940 RNF185Q96GF1 192 aa12.57□□□□□ -0.4
CXXC1-212ENST00000589940 RAB4AP20338 218 aa12.57□□□□□ -0.4
CXXC1-212ENST00000589940 MRPL51Q4U2R6 128 aaKnown RBP12.57□□□□□ -0.4
CXXC1-212ENST00000589940 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
CXXC1-212ENST00000589940 X6R8D5 127 aa12.57□□□□□ -0.4
CXXC1-212ENST00000589940 SMIM9A6NGZ8 99 aa12.56□□□□□ -0.4
CXXC1-212ENST00000589940 ALKBH7Q9BT30 221 aaPredicted RBP12.56□□□□□ -0.4
CXXC1-212ENST00000589940 JPT2Q9H910 190 aa12.56□□□□□ -0.4
CXXC1-212ENST00000589940 PLAC8L1A1L4L8 177 aa12.56□□□□□ -0.4
CXXC1-212ENST00000589940 SMIM17P0DL12 118 aa12.55□□□□□ -0.4
CXXC1-212ENST00000589940 DAZ2Q13117 558 aaKnown RBP12.55□□□□□ -0.4
CXXC1-212ENST00000589940 KIF25-AS1Q9Y6Z4 181 aa12.55□□□□□ -0.4
CXXC1-212ENST00000589940 S100A6P06703 90 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms