RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ZNF738Q8NE65 137 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 OR4B1Q8NGF8 309 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 OR2G3Q8NGZ4 309 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 LRRC20Q8TCA0 184 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 PGLYRP4Q96LB8 373 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 FAM210AQ96ND0 272 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 SH3BGRL3Q9H299 93 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 RPRMQ9NS64 109 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF586Q9NXT0 402 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 FUT9Q9Y231 359 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 CHTOPQ9Y3Y2 248 aaKnown RBP5.37□□□□□ -1.55
ATG4D-210ENST00000588972 HLA-DRB4X5D2U9 266 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 HSPG2P98160 4391 aa5.37□□□□□ -1.55
ATG4D-210ENST00000588972 A0A0J9YX75 114 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF705FA8MVS1 300 aaPredicted RBP5.36□□□□□ -1.55
ATG4D-210ENST00000588972 MBP02144 154 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 OR10J4P0C629 311 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 ATP6V0CP27449 155 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 MRPL23Q16540 153 aaKnown RBP5.36□□□□□ -1.55
ATG4D-210ENST00000588972 SAMD13Q5VXD3 122 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 EBLN2Q6P2I7 272 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 TEX261Q6UWH6 196 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 DPPA3Q6W0C5 159 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 BLNKQ8WV28 456 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 GTSF1Q8WW33 167 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 FAM167A-AS1Q96KT0 104 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 SLC35B3Q9H1N7 401 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF331Q9NQX6 463 aaPredicted RBP5.36□□□□□ -1.55
ATG4D-210ENST00000588972 TP53TG1Q9Y2A0 90 aa5.36□□□□□ -1.55
ATG4D-210ENST00000588972 TRBV19A0A075B6N1 114 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 IGHV1OR15-1A0A075B7D0 117 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 HMGB3O15347 200 aaKnown RBP5.35□□□□□ -1.55
ATG4D-210ENST00000588972 OR7C2O60412 319 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 RHOBP62745 196 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 HIST1H1AQ02539 215 aaPredicted RBP5.35□□□□□ -1.55
ATG4D-210ENST00000588972 PSG3Q16557 428 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 MORN3Q6PF18 240 aaPredicted RBP5.35□□□□□ -1.55
ATG4D-210ENST00000588972 ZNF680Q8NEM1 530 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 OR11H2Q8NH07 326 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 RPUSD4Q96CM3 377 aaKnown RBP5.35□□□□□ -1.55
ATG4D-210ENST00000588972 FXYD5Q96DB9 178 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 SLC50A1Q9BRV3 221 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 PAXXQ9BUH6 204 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 MRPL32Q9BYC8 188 aaKnown RBP5.35□□□□□ -1.55
ATG4D-210ENST00000588972 TMEM14CQ9P0S9 112 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 XCL2Q9UBD3 114 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 MUC4Q99102 2169 aa5.35□□□□□ -1.55
ATG4D-210ENST00000588972 M0R2Z0 102 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 M0R3E3 92 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 DEFB4AO15263 64 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 HIST1H1EP10412 219 aaKnown RBP5.34□□□□□ -1.55
ATG4D-210ENST00000588972 GATA1P15976 413 aaPredicted RBP5.34□□□□□ -1.55
ATG4D-210ENST00000588972 M6PRP20645 277 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 UBE2L3P68036 154 aaKnown RBP5.34□□□□□ -1.55
ATG4D-210ENST00000588972 PSG9Q00887 426 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 PRR4Q16378 134 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 GUK1Q16774 197 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 SPINK13Q1W4C9 94 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 ACOT6Q3I5F7 207 aaPredicted RBP5.34□□□□□ -1.55
ATG4D-210ENST00000588972 GFI1BQ5VTD9 330 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 AMTNQ6UX39 209 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 Q6ZTC4 211 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 SSX7Q7RTT5 188 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 EXOC3-AS1Q8N2X6 119 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 OR8A1Q8NGG7 326 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 OR10G4Q8NGN3 311 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 OR10G9Q8NGN4 311 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 RARRES2Q99969 163 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 OR51M1Q9H341 326 aa5.34□□□□□ -1.55
ATG4D-210ENST00000588972 TRAV12-2A0A075B6T6 113 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 A8MTW9 85 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 NBEAP1P0C6P0 100 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 CDC34P49427 236 aaPredicted RBP5.33□□□□□ -1.56
ATG4D-210ENST00000588972 SULT1A2P50226 295 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 RAB14P61106 215 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 NUTF2P61970 127 aaKnown RBP5.33□□□□□ -1.56
ATG4D-210ENST00000588972 KHDC3LQ587J8 217 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 AKR1C8PQ5T2L2 129 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 CHCHD10Q8WYQ3 142 aaPredicted RBP5.33□□□□□ -1.56
ATG4D-210ENST00000588972 VSIG2Q96IQ7 327 aa5.33□□□□□ -1.56
ATG4D-210ENST00000588972 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 IGKV2-40A0A087WW87 121 aaPredicted RBP5.32□□□□□ -1.56
ATG4D-210ENST00000588972 A0A1W2PPV4 95 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 TEX46H3BTG2 121 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 TSPAN13O95857 204 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 IGKV2D-40P01614 121 aaPredicted RBP5.32□□□□□ -1.56
ATG4D-210ENST00000588972 RBMY1A1P0DJD3 496 aaKnown RBP5.32□□□□□ -1.56
ATG4D-210ENST00000588972 ARL14EPLP0DKL9 152 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 TAS2R45P59539 299 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 RANP62826 216 aaKnown RBP5.32□□□□□ -1.56
ATG4D-210ENST00000588972 IFITM2Q01629 132 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 ERCC8Q13216 396 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 PDE6HQ13956 83 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 RBMY1FQ15415 496 aaKnown RBP5.32□□□□□ -1.56
ATG4D-210ENST00000588972 ZNF726P1Q15940 193 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 ALKAL2Q6UX46 152 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 LINC00336Q6ZUF6 198 aa5.32□□□□□ -1.56
ATG4D-210ENST00000588972 Q8NAQ8 132 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms