RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 PRSS3P2Q8NHM4 247 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 ZMAT4Q9H898 229 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 IGHV3OR16-10A0A075B7F0 116 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 F8W735 103 aaPredicted RBP7.43□□□□□ -1.22
LINC01539-201ENST00000587904 PEX7O00628 323 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 DUSP14O95147 198 aaKnown RBP7.43□□□□□ -1.22
LINC01539-201ENST00000587904 ECSCRQ19T08 205 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 LINC01559Q495D7 138 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 ZNF491Q8N8L2 437 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 ZNF492Q9P255 531 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 ANKRD17O75179 2603 aaKnown RBP7.43□□□□□ -1.22
LINC01539-201ENST00000587904 SPG11Q96JI7 2443 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 MED13LQ71F56 2210 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 A0A096LNJ9 63 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 CRLF1O75462 422 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 NDUFA7O95182 113 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 DEFB113Q30KQ7 82 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
LINC01539-201ENST00000587904 CIARTQ8N365 385 aaPredicted RBP7.43□□□□□ -1.22
LINC01539-201ENST00000587904 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 PRSS22Q9GZN4 317 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 PTPN13Q12923 2485 aa7.43□□□□□ -1.22
LINC01539-201ENST00000587904 A6NDX4 124 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 HOXA3O43365 443 aaPredicted RBP7.42□□□□□ -1.22
LINC01539-201ENST00000587904 HBDP02042 147 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 C19orf54Q5BKX5 351 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 BAALCQ8WXS3 180 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 OTORQ9NRC9 128 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 TRAV41A0A0B4J266 112 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 FAM223BA6NKX1 122 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 CYSRT1A8MQ03 144 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 H3BUA1 57 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 IGF1P05019 195 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 EMP1P54849 157 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 UBE2D3P61077 147 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 UBE2D2P62837 147 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 C15orf32Q32M92 178 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.22
LINC01539-201ENST00000587904 FAM223AQ8IWN6 122 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 EPDR1Q9UM22 224 aa7.42□□□□□ -1.22
LINC01539-201ENST00000587904 TIMM8BQ9Y5J9 83 aaPredicted RBP7.42□□□□□ -1.22
LINC01539-201ENST00000587904 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 TRBV7-1A0A0A6YYK4 115 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 H3BUX3 64 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 M0R2P5 195 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 CTSGP08311 255 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 SCGB1C2P0DMR2 95 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 PDE6HQ13956 83 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 ANKRD29Q8N6D5 301 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 EEF1AKMT3Q96AZ1 226 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 NAV2Q8IVL1 2488 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 USP9YO00507 2555 aaPredicted RBP7.41□□□□□ -1.22
LINC01539-201ENST00000587904 CRYBG3Q68DQ2 2970 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 CENPEQ02224 2701 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 FBN2P35556 2912 aa7.41□□□□□ -1.22
LINC01539-201ENST00000587904 IGKV2D-26A0A0A0MRZ7 120 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 PGPA6NDG6 321 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 IGHG2P01859 326 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 ORM1P02763 201 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 PSMB2P49721 201 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 FMC1Q96HJ9 113 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 PGLYRP4Q96LB8 373 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 Q9H3A6 140 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 ZNF580Q9UK33 172 aa7.4□□□□□ -1.22
LINC01539-201ENST00000587904 TRBV19A0A075B6N1 114 aa7.4□□□□□ -1.23
LINC01539-201ENST00000587904 MYMXA0A1B0GTQ4 84 aa7.4□□□□□ -1.23
LINC01539-201ENST00000587904 LINC01600Q96MT4 127 aa7.4□□□□□ -1.23
LINC01539-201ENST00000587904 HHLA3Q9XRX5 114 aa7.4□□□□□ -1.23
LINC01539-201ENST00000587904 S4R3C0 116 aa7.4□□□□□ -1.23
LINC01539-201ENST00000587904 CELSR2Q9HCU4 2923 aa7.4□□□□□ -1.23
LINC01539-201ENST00000587904 TRAV8-2A0A0B4J237 113 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 G3V318 75 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 AVPP01185 164 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 C3orf22Q8N5N4 141 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 DUX3Q96PT4 197 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 TRBV6-1A0A0K0K1D8 114 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 C19orf71A6NCJ1 209 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 RNF223E7ERA6 249 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 MRPS12O15235 138 aaKnown RBP7.39□□□□□ -1.23
LINC01539-201ENST00000587904 NPYP01303 97 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 P01737 135 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 TCRAP04437 139 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 IGHV4-31P0DP07 118 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 KRTAP10-9P60411 292 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 RIGQ13278 110 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 C9orf153Q5TBE3 101 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 C15orf53Q8NAA6 179 aa7.39□□□□□ -1.23
LINC01539-201ENST00000587904 ABCA1O95477 2261 aa7.38□□□□□ -1.23
LINC01539-201ENST00000587904 LINC01548A6NM66 108 aa7.38□□□□□ -1.23
LINC01539-201ENST00000587904 UQCRQO14949 82 aa7.38□□□□□ -1.23
LINC01539-201ENST00000587904 FSHBP01225 129 aa7.38□□□□□ -1.23
LINC01539-201ENST00000587904 IGHV3-23P01764 117 aa7.38□□□□□ -1.23
LINC01539-201ENST00000587904 IGKCP01834 107 aa7.38□□□□□ -1.23
LINC01539-201ENST00000587904 HERVK_113P63121 156 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms