RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 RASL11AQ6T310 242 aa10.78□□□□□ -0.68
NFIX-208ENST00000587260 OR11H2Q8NH07 326 aa10.78□□□□□ -0.68
NFIX-208ENST00000587260 FAM210BQ96KR6 192 aa10.78□□□□□ -0.68
NFIX-208ENST00000587260 OVOL2Q9BRP0 275 aa10.78□□□□□ -0.68
NFIX-208ENST00000587260 MDFICQ9P1T7 246 aa10.78□□□□□ -0.68
NFIX-208ENST00000587260 A0A1B0GW15 77 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 A0A1B0GXF2 115 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 H3BVH4 76 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 C11orf72Q8NBR9 251 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 SPATA25Q9BR10 227 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 TM2D3Q9BRN9 247 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 X6R8D5 127 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 NBEAL2Q6ZNJ1 2754 aa10.77□□□□□ -0.69
NFIX-208ENST00000587260 CACNG7P62955 275 aa10.76□□□□□ -0.69
NFIX-208ENST00000587260 RIGQ13278 110 aa10.76□□□□□ -0.69
NFIX-208ENST00000587260 COX19Q49B96 90 aa10.76□□□□□ -0.69
NFIX-208ENST00000587260 ZNF493Q6ZR52 646 aa10.76□□□□□ -0.69
NFIX-208ENST00000587260 BORCS7Q96B45 105 aa10.76□□□□□ -0.69
NFIX-208ENST00000587260 TPPP3Q9BW30 176 aa10.76□□□□□ -0.69
NFIX-208ENST00000587260 SMIM9A6NGZ8 99 aa10.75□□□□□ -0.69
NFIX-208ENST00000587260 SPINK4O60575 86 aa10.75□□□□□ -0.69
NFIX-208ENST00000587260 NXPH4O95158 308 aa10.75□□□□□ -0.69
NFIX-208ENST00000587260 AZU1P20160 251 aa10.75□□□□□ -0.69
NFIX-208ENST00000587260 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
NFIX-208ENST00000587260 MRPL54Q6P161 138 aaKnown RBP10.75□□□□□ -0.69
NFIX-208ENST00000587260 RNASE8Q8TDE3 154 aaKnown RBP10.75□□□□□ -0.69
NFIX-208ENST00000587260 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
NFIX-208ENST00000587260 PTH2Q96A98 100 aa10.75□□□□□ -0.69
NFIX-208ENST00000587260 TP53TG1Q9Y2A0 90 aa10.75□□□□□ -0.69
NFIX-208ENST00000587260 PRKDCP78527 4128 aaKnown RBP10.75□□□□□ -0.69
NFIX-208ENST00000587260 RAB5AP20339 215 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 NTF3P20783 257 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 ZNF415Q09FC8 603 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 GATD1Q8NB37 220 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 OR10AG1Q8NH19 301 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 SPXQ9BT56 116 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 ZMAT4Q9H898 229 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 PHLDA3Q9Y5J5 127 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 DEFB4AO15263 64 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 S100A8P05109 93 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 HBBP68871 147 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 PIK3CD-AS1Q5SR53 167 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 C16orf74Q96GX8 76 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 GNB1LQ9BYB4 327 aa10.74□□□□□ -0.69
NFIX-208ENST00000587260 TIMM8BQ9Y5J9 83 aaPredicted RBP10.74□□□□□ -0.69
NFIX-208ENST00000587260 IGHV4-28A0A0C4DH34 117 aa10.73□□□□□ -0.69
NFIX-208ENST00000587260 EMP1P54849 157 aa10.73□□□□□ -0.69
NFIX-208ENST00000587260 ZFP82Q8N141 532 aa10.73□□□□□ -0.69
NFIX-208ENST00000587260 GSN-AS1Q9NRJ2 163 aa10.73□□□□□ -0.69
NFIX-208ENST00000587260 TENM3Q9P273 2699 aa10.72□□□□□ -0.69
NFIX-208ENST00000587260 PLAC8L1A1L4L8 177 aa10.72□□□□□ -0.69
NFIX-208ENST00000587260 MIFP14174 115 aa10.72□□□□□ -0.69
NFIX-208ENST00000587260 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
NFIX-208ENST00000587260 Q8NAQ8 132 aa10.72□□□□□ -0.69
NFIX-208ENST00000587260 NDUFAF3Q9BU61 184 aa10.72□□□□□ -0.69
NFIX-208ENST00000587260 MUC21A0A0G2JKD1 596 aa10.71□□□□□ -0.69
NFIX-208ENST00000587260 MUC21A0A140T8X8 626 aa10.71□□□□□ -0.69
NFIX-208ENST00000587260 M0R2P5 195 aa10.71□□□□□ -0.69
NFIX-208ENST00000587260 MT-ND6P03923 174 aa10.71□□□□□ -0.69
NFIX-208ENST00000587260 DAZ2Q13117 558 aaKnown RBP10.71□□□□□ -0.69
NFIX-208ENST00000587260 TWIST1Q15672 202 aa10.71□□□□□ -0.69
NFIX-208ENST00000587260 TMEM136Q6ZRR5 245 aa10.71□□□□□ -0.69
NFIX-208ENST00000587260 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.69
NFIX-208ENST00000587260 HLA-DQA1P01909 254 aa10.7□□□□□ -0.7
NFIX-208ENST00000587260 CAMPP49913 170 aa10.7□□□□□ -0.7
NFIX-208ENST00000587260 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
NFIX-208ENST00000587260 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.7□□□□□ -0.7
NFIX-208ENST00000587260 SYT8Q8NBV8 401 aa10.7□□□□□ -0.7
NFIX-208ENST00000587260 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
NFIX-208ENST00000587260 MUC4Q99102 2169 aa10.7□□□□□ -0.7
NFIX-208ENST00000587260 DNAH9Q9NYC9 4486 aa10.7□□□□□ -0.7
NFIX-208ENST00000587260 M0R381 172 aa10.69□□□□□ -0.7
NFIX-208ENST00000587260 RPS10P46783 165 aaKnown RBP10.69□□□□□ -0.7
NFIX-208ENST00000587260 LGALS9BQ3B8N2 356 aa10.69□□□□□ -0.7
NFIX-208ENST00000587260 RASL10AQ92737 203 aa10.69□□□□□ -0.7
NFIX-208ENST00000587260 COL7A1Q02388 2944 aa10.69□□□□□ -0.7
NFIX-208ENST00000587260 HUWE1Q7Z6Z7 4374 aaKnown RBP10.69□□□□□ -0.7
NFIX-208ENST00000587260 SNURFLB1AK76 121 aa10.68□□□□□ -0.7
NFIX-208ENST00000587260 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
NFIX-208ENST00000587260 ZNF876PQ49A33 203 aa10.68□□□□□ -0.7
NFIX-208ENST00000587260 A0A0J9YWU9 116 aa10.68□□□□□ -0.7
NFIX-208ENST00000587260 SSTP61278 116 aa10.68□□□□□ -0.7
NFIX-208ENST00000587260 TRAPPC1Q9Y5R8 145 aa10.68□□□□□ -0.7
NFIX-208ENST00000587260 PHOX2AO14813 284 aa10.67□□□□□ -0.7
NFIX-208ENST00000587260 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
NFIX-208ENST00000587260 RAB4BP61018 213 aa10.67□□□□□ -0.7
NFIX-208ENST00000587260 SMIM15Q7Z3B0 74 aa10.67□□□□□ -0.7
NFIX-208ENST00000587260 NOP10Q9NPE3 64 aaKnown RBP10.67□□□□□ -0.7
NFIX-208ENST00000587260 KIF25-AS1Q9Y6Z4 181 aa10.67□□□□□ -0.7
NFIX-208ENST00000587260 TGP01266 2768 aa10.67□□□□□ -0.7
NFIX-208ENST00000587260 EVI2AP22794 236 aa10.66□□□□□ -0.7
NFIX-208ENST00000587260 FAM104BQ5XKR9 115 aa10.66□□□□□ -0.7
NFIX-208ENST00000587260 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
NFIX-208ENST00000587260 MRPL18Q9H0U6 180 aaKnown RBP10.66□□□□□ -0.7
NFIX-208ENST00000587260 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
NFIX-208ENST00000587260 MRPL16Q9NX20 251 aaKnown RBP10.66□□□□□ -0.7
NFIX-208ENST00000587260 CELA1Q9UNI1 258 aa10.66□□□□□ -0.7
NFIX-208ENST00000587260 A8MWV9 139 aa10.65□□□□□ -0.7
NFIX-208ENST00000587260 TRGC2P03986 189 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms