RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PRSS47A8MTI9 375 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 NPYP01303 97 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 DEFB1P60022 68 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 DEFB125Q8N687 156 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 DYNLRB2Q8TF09 96 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 ESM1Q9NQ30 184 aa8.42□□□□□ -1.06
LIG3-204ENST00000585740 TRAV25A0A0B4J276 109 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 LOC389332A0A1B0GUA5 103 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 NXPH4O95158 308 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 PPP1R17O96001 155 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 HBDP02042 147 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 CDKN1BP46527 198 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 TDRG1Q3Y452 100 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 ADAMTSL5Q6ZMM2 481 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 C18orf65Q6ZTR6 163 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
LIG3-204ENST00000585740 OR2K2Q8NGT1 345 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 DPH3P1Q9H4G8 78 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 PAM16Q9Y3D7 125 aa8.41□□□□□ -1.06
LIG3-204ENST00000585740 TRAV9-2A0A087WT02 112 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 A8MTW9 85 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 M0R381 172 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 CRLF1O75462 422 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 NCR2O95944 276 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 EVI2AP22794 236 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 DEFB136Q30KP8 78 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 SPATA45Q537H7 98 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
LIG3-204ENST00000585740 Q6ZQT7 251 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 SPATA12Q7Z6I5 190 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 Q8N8P6 123 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 MIEN1Q9BRT3 115 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
LIG3-204ENST00000585740 TSSC4Q9Y5U2 329 aaPredicted RBP8.4□□□□□ -1.06
LIG3-204ENST00000585740 SELENOKQ9Y6D0 94 aa8.4□□□□□ -1.06
LIG3-204ENST00000585740 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
LIG3-204ENST00000585740 NDUFA7O95182 113 aa8.39□□□□□ -1.07
LIG3-204ENST00000585740 RNASE3P12724 160 aaKnown RBP8.39□□□□□ -1.07
LIG3-204ENST00000585740 HILS1P60008 231 aa8.39□□□□□ -1.07
LIG3-204ENST00000585740 ZNF705AQ6ZN79 300 aaPredicted RBP8.39□□□□□ -1.07
LIG3-204ENST00000585740 DLX4Q92988 240 aaPredicted RBP8.39□□□□□ -1.07
LIG3-204ENST00000585740 C14orf144Q96I85 54 aa8.39□□□□□ -1.07
LIG3-204ENST00000585740 ZNF747Q9BV97 191 aa8.39□□□□□ -1.07
LIG3-204ENST00000585740 TRGV11A0A075B6L2 103 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 IGHV1OR15-1A0A075B7D0 117 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 GNRH2O43555 120 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 HLA-DRB4P13762 266 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 FHL3Q13643 280 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 DEFB114Q30KQ6 69 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 SYT8Q8NBV8 401 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 SPAG8Q99932 426 aaPredicted RBP8.38□□□□□ -1.07
LIG3-204ENST00000585740 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 HLA-DRB4X5D2U9 266 aa8.38□□□□□ -1.07
LIG3-204ENST00000585740 CUBNO60494 3623 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 K7EMI3 77 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 CCL24O00175 119 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 CD7P09564 240 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 SMIM17P0DL12 118 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 FCER1GP30273 86 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
LIG3-204ENST00000585740 DEFB131AP59861 70 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 KIR3DS1Q14943 382 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 LINC01545Q5VT33 79 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 AMTNQ6UX39 209 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 LINC00173Q6ZV60 143 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 POM121L12Q8N7R1 296 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 NRACQ8N912 160 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 LINC01006Q8NI28 216 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 TMEM158Q8WZ71 300 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 RAX2Q96IS3 184 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
LIG3-204ENST00000585740 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 ANK3Q12955 4377 aaKnown RBP8.36□□□□□ -1.07
LIG3-204ENST00000585740 A0A096LNJ9 63 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 CD28P10747 220 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 LGALS9BQ3B8N2 356 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 LGALS9CQ6DKI2 356 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 C9orf85Q96MD7 179 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 CLUHP3Q96NS8 147 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
LIG3-204ENST00000585740 SONP18583 2426 aaKnown RBP8.35□□□□□ -1.07
LIG3-204ENST00000585740 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
LIG3-204ENST00000585740 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
LIG3-204ENST00000585740 H3BMM0 161 aa8.35□□□□□ -1.07
LIG3-204ENST00000585740 IGKV3-20P01619 116 aa8.35□□□□□ -1.07
LIG3-204ENST00000585740 SPINK13Q1W4C9 94 aa8.35□□□□□ -1.07
LIG3-204ENST00000585740 IFI27L1Q96BM0 104 aa8.35□□□□□ -1.07
LIG3-204ENST00000585740 DUX3Q96PT4 197 aa8.35□□□□□ -1.07
LIG3-204ENST00000585740 AGRNO00468 2067 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 MUC4Q99102 2169 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 M0R143 59 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms