RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SPANXN1Q5VSR9 72 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 TMEM256Q8N2U0 113 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 SCRT2Q9NQ03 307 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 NAGKQ9UJ70 344 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 LAMTOR2Q9Y2Q5 125 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 U3KQK5 164 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 COL7A1Q02388 2944 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 TRAV12-3A0A0B4J271 114 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 KNCNA6PVL3 124 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 OR11H12B2RN74 326 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 SERF1AO75920 110 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 PMCHP20382 165 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 PDZD11Q5EBL8 140 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 ORMDL3Q8N138 153 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 OR10D4PQ8NGN7 298 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 CHCHD1Q96BP2 118 aaKnown RBP7.68□□□□□ -1.18
LIG3-203ENST00000585370 TP53TG3Q9ULZ0 132 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 PHLDA3Q9Y5J5 127 aa7.68□□□□□ -1.18
LIG3-203ENST00000585370 TRGV11A0A075B6L2 103 aa7.67□□□□□ -1.18
LIG3-203ENST00000585370 IGHV1OR15-1A0A075B7D0 117 aa7.67□□□□□ -1.18
LIG3-203ENST00000585370 NUTF2P61970 127 aaKnown RBP7.67□□□□□ -1.18
LIG3-203ENST00000585370 LINC00467Q9BRT7 94 aa7.67□□□□□ -1.18
LIG3-203ENST00000585370 SAMD10Q9BYL1 202 aa7.67□□□□□ -1.18
LIG3-203ENST00000585370 H3BVH4 76 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 GNRH2O43555 120 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 NXPH4O95158 308 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 IGKV3-20P01619 116 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 LINC00614P0C842 121 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 RAB4AP20338 218 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 CKS2P33552 79 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 KIR3DS1Q14943 382 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 SPINK13Q1W4C9 94 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 MRPL51Q4U2R6 128 aaKnown RBP7.66□□□□□ -1.18
LIG3-203ENST00000585370 MUC21Q5SSG8 566 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 NIT1Q86X76 327 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 STHQ8IWL8 128 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 AMN1Q8IY45 258 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 LINC00482Q8N8I6 264 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 OR10AG1Q8NH19 301 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
LIG3-203ENST00000585370 MCRIP2Q9BUT9 160 aaKnown RBP7.66□□□□□ -1.18
LIG3-203ENST00000585370 MUC21A0A0G2JKD1 596 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 MUC21A0A140T8X8 626 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 M0R2Z0 102 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 NUPR1O60356 82 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 HSBP1O75506 76 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 CD7P09564 240 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 RNASE3P12724 160 aaKnown RBP7.65□□□□□ -1.18
LIG3-203ENST00000585370 LINC00310P59036 64 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 ODF3L2Q3SX64 289 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 C9orf66Q5T8R8 295 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 Q6ZQT7 251 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 SYT8Q8NBV8 401 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 MRAP2Q96G30 205 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 C12orf57Q99622 126 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 MSRB1Q9NZV6 116 aa7.65□□□□□ -1.18
LIG3-203ENST00000585370 TRAV12-2A0A075B6T6 113 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 IGHV3-16A0A0C4DH30 117 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 D6R8Y8 96 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 PPP1R17O96001 155 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 AMTP48728 403 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 SSTP61278 116 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 JOSD1Q15040 202 aaPredicted RBP7.64□□□□□ -1.19
LIG3-203ENST00000585370 PIK3CD-AS1Q5SR53 167 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 PRSS3P2Q8NHM4 247 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 MRAPQ8TCY5 172 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 PTH2Q96A98 100 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 RNF185Q96GF1 192 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 DPH3P1Q9H4G8 78 aa7.64□□□□□ -1.19
LIG3-203ENST00000585370 TENM3Q9P273 2699 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 PRSS47A8MTI9 375 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
LIG3-203ENST00000585370 INSP01308 110 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 IQCJQ1A5X6 159 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 RNASEKQ6P5S7 137 aaKnown RBP7.63□□□□□ -1.19
LIG3-203ENST00000585370 FA2HQ7L5A8 372 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 TRPT1Q86TN4 253 aaKnown RBP7.63□□□□□ -1.19
LIG3-203ENST00000585370 Q8N1Y9 231 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 DEFB125Q8N687 156 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 WFDC9Q8NEX5 89 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 AP1S3Q96PC3 154 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 RCHY1Q96PM5 261 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 GSN-AS1Q9NRJ2 163 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 TIMM8BQ9Y5J9 83 aaPredicted RBP7.63□□□□□ -1.19
LIG3-203ENST00000585370 RYR3Q15413 4870 aa7.63□□□□□ -1.19
LIG3-203ENST00000585370 RBMY1BA6NDE4 496 aaKnown RBP7.62□□□□□ -1.19
LIG3-203ENST00000585370 RBMY1EA6NEQ0 496 aaKnown RBP7.62□□□□□ -1.19
LIG3-203ENST00000585370 M0R381 172 aa7.62□□□□□ -1.19
LIG3-203ENST00000585370 RBMY1DP0C7P1 496 aaKnown RBP7.62□□□□□ -1.19
LIG3-203ENST00000585370 EVI2AP22794 236 aa7.62□□□□□ -1.19
LIG3-203ENST00000585370 PYY3Q5JQD4 70 aa7.62□□□□□ -1.19
LIG3-203ENST00000585370 MORN3Q6PF18 240 aaPredicted RBP7.62□□□□□ -1.19
LIG3-203ENST00000585370 POM121L12Q8N7R1 296 aa7.62□□□□□ -1.19
LIG3-203ENST00000585370 C1QTNF4Q9BXJ3 329 aa7.62□□□□□ -1.19
LIG3-203ENST00000585370 MAP1LC3AQ9H492 121 aa7.62□□□□□ -1.19
LIG3-203ENST00000585370 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms