RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 HIGD1CA8MV81 97 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 GZMBP10144 247 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 RNASE3P12724 160 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 ASIPP42127 132 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 ELOBQ15370 118 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 WDR73Q6P4I2 378 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 KCNIP4Q6PIL6 250 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 Q6ZWC4 215 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 FER1L6-AS1Q8NA97 138 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 C11orf72Q8NBR9 251 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 NUP35Q8NFH5 326 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 IL17DQ8TAD2 202 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 LINC01587Q99440 93 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 NAT8BQ9UHF3 227 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 NAGKQ9UJ70 344 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 TP53TG1Q9Y2A0 90 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 MUC4Q99102 2169 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 IGHV4-4A0A075B6R2 117 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 A0A1B0GXF2 115 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 SMIM9A6NGZ8 99 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 F2Z2F3 143 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 GNRH2O43555 120 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 NXPH4O95158 308 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 S100PP25815 95 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 TCL1AP56279 114 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 TMEM88Q6PEY1 159 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 ZNF493Q6ZR52 646 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 RNASE8Q8TDE3 154 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 PTH2Q96A98 100 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 RNF183Q96D59 192 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 TMEM208Q9BTX3 173 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 KRTAP9-9Q9BYP9 154 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
SMCHD1-212ENST00000585229 PLAC8L1A1L4L8 177 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 CBY3A6NI87 242 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 SPRY2O43597 315 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 ARMS2P0C7Q2 107 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 FAM3BP58499 235 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 ZNF415Q09FC8 603 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 DEFB135Q30KP9 77 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 LYZL1Q6UWQ5 148 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 ATP5L2Q7Z4Y8 100 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 TMEM263Q8WUH6 116 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 C16orf74Q96GX8 76 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 BTF3L4Q96K17 158 aa7.11□□□□□ -1.27
SMCHD1-212ENST00000585229 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 A0A1B0GW15 77 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 COLCA2A8K830 154 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 H3BVH4 76 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 PRB2P02812 416 aaPredicted RBP7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 AZU1P20160 251 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 S100A4P26447 101 aaKnown RBP7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 CACNG7P62955 275 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 RRN3P1Q2M238 152 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 PIK3CD-AS1Q5SR53 167 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 GATD1Q8NB37 220 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 PGLYRP4Q96LB8 373 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 RCHY1Q96PM5 261 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 SPXQ9BT56 116 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 URGCP-MRPS24S4R325 110 aa7.1□□□□□ -1.27
SMCHD1-212ENST00000585229 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 IGHV3OR16-12A0A075B7B8 117 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 TGIF2-C20orf24A0A0A6YYL0 155 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 PRM2P04554 102 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 RASL11AQ6T310 242 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 OR10AG1Q8NH19 301 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 OVOL2Q9BRP0 275 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 NDUFAF3Q9BU61 184 aa7.09□□□□□ -1.27
SMCHD1-212ENST00000585229 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 M0R2P5 195 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 MIFP14174 115 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 HBBP68871 147 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 DAZ2Q13117 558 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 RIGQ13278 110 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 COX19Q49B96 90 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 ZFP82Q8N141 532 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 Q8NAQ8 132 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 OR11H2Q8NH07 326 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 TM2D3Q9BRN9 247 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 GSN-AS1Q9NRJ2 163 aa7.08□□□□□ -1.28
SMCHD1-212ENST00000585229 SPINK4O60575 86 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 NTF3P20783 257 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 LGALS9BQ3B8N2 356 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 MRPL54Q6P161 138 aaKnown RBP7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 SBSPONQ8IVN8 264 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 LINC00612Q8N6U2 182 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 SYT8Q8NBV8 401 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 RASL10AQ92737 203 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 BORCS7Q96B45 105 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 FAM210BQ96KR6 192 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 TPPP3Q9BW30 176 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 PHLDA3Q9Y5J5 127 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 NACAE9PAV3 2078 aa7.07□□□□□ -1.28
SMCHD1-212ENST00000585229 HUWE1Q7Z6Z7 4374 aaKnown RBP7.06□□□□□ -1.28
SMCHD1-212ENST00000585229 SNURFLB1AK76 121 aa7.06□□□□□ -1.28
SMCHD1-212ENST00000585229 S100A8P05109 93 aa7.06□□□□□ -1.28
SMCHD1-212ENST00000585229 HTN1P15515 57 aa7.06□□□□□ -1.28
SMCHD1-212ENST00000585229 SPANXN1Q5VSR9 72 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms