RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
TOP3A-220ENST00000585031 DERL1Q9BUN8 251 aa12.28□□□□□ -0.44
TOP3A-220ENST00000585031 TMEM242Q9NWH2 141 aa12.28□□□□□ -0.44
TOP3A-220ENST00000585031 TRBV19A0A075B6N1 114 aa12.27□□□□□ -0.45
TOP3A-220ENST00000585031 PPP1R2P9O14990 202 aa12.27□□□□□ -0.45
TOP3A-220ENST00000585031 IGLC2P0DOY2 106 aa12.27□□□□□ -0.45
TOP3A-220ENST00000585031 GNG4P50150 75 aa12.27□□□□□ -0.45
TOP3A-220ENST00000585031 HIST1H1AQ02539 215 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-220ENST00000585031 LINC01551Q86U37 167 aa12.27□□□□□ -0.45
TOP3A-220ENST00000585031 ANAPC16Q96DE5 110 aa12.27□□□□□ -0.45
TOP3A-220ENST00000585031 EPDR1Q9UM22 224 aa12.27□□□□□ -0.45
TOP3A-220ENST00000585031 MRPS12O15235 138 aaKnown RBP12.26□□□□□ -0.45
TOP3A-220ENST00000585031 ZNF738Q8NE65 137 aa12.26□□□□□ -0.45
TOP3A-220ENST00000585031 OR8A1Q8NGG7 326 aa12.26□□□□□ -0.45
TOP3A-220ENST00000585031 AAMDCQ9H7C9 122 aa12.26□□□□□ -0.45
TOP3A-220ENST00000585031 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
TOP3A-220ENST00000585031 H7BYZ3 331 aa12.25□□□□□ -0.45
TOP3A-220ENST00000585031 ZNF253O75346 499 aa12.25□□□□□ -0.45
TOP3A-220ENST00000585031 NXPH4O95158 308 aa12.25□□□□□ -0.45
TOP3A-220ENST00000585031 UBE2G1P62253 170 aa12.25□□□□□ -0.45
TOP3A-220ENST00000585031 CENPWQ5EE01 88 aa12.25□□□□□ -0.45
TOP3A-220ENST00000585031 K7EQM0 130 aa12.24□□□□□ -0.45
TOP3A-220ENST00000585031 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
TOP3A-220ENST00000585031 Q6ZTI0 123 aa12.24□□□□□ -0.45
TOP3A-220ENST00000585031 ISOC2Q96AB3 205 aa12.24□□□□□ -0.45
TOP3A-220ENST00000585031 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
TOP3A-220ENST00000585031 TMA7Q9Y2S6 64 aaKnown RBP12.24□□□□□ -0.45
TOP3A-220ENST00000585031 A0A087X0K7 114 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 H3BTX0 84 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 S100PP25815 95 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 CSN1S1P47710 185 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 TMEM183BQ1AE95 376 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 ARL6IP6Q8N6S5 226 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 SMIM12Q96EX1 92 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 FMC1Q96HJ9 113 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 RPH3ALQ9UNE2 315 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 PLA2G2DQ9UNK4 145 aa12.23□□□□□ -0.45
TOP3A-220ENST00000585031 TRBV20OR9-2A0A075B6H5 130 aa12.22□□□□□ -0.45
TOP3A-220ENST00000585031 SERTM2A0A1B0GWG4 89 aa12.22□□□□□ -0.45
TOP3A-220ENST00000585031 TCRAP04437 139 aa12.22□□□□□ -0.45
TOP3A-220ENST00000585031 CDKN1BP46527 198 aa12.22□□□□□ -0.45
TOP3A-220ENST00000585031 GNG5P63218 68 aa12.22□□□□□ -0.45
TOP3A-220ENST00000585031 OCC1Q8TAD7 63 aa12.22□□□□□ -0.45
TOP3A-220ENST00000585031 PKHD1L1Q86WI1 4243 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 PSG3Q16557 428 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 BAGE2Q86Y30 109 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 OR10G8Q8NGN5 311 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 SFRP2Q96HF1 295 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 BIN3Q9NQY0 253 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.45
TOP3A-220ENST00000585031 COLCA2A8K830 154 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 GFI1BQ5VTD9 330 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 KCNIP4Q6PIL6 250 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 NFE4Q86UQ8 179 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 EXOC3-AS1Q8N2X6 119 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 BTF3L4Q96K17 158 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 PPP1R14DQ9NXH3 145 aa12.2□□□□□ -0.46
TOP3A-220ENST00000585031 TRBV6-1A0A0K0K1D8 114 aa12.19□□□□□ -0.46
TOP3A-220ENST00000585031 PGPEP1LA6NFU8 196 aa12.19□□□□□ -0.46
TOP3A-220ENST00000585031 FBLL1A6NHQ2 334 aaKnown RBP12.19□□□□□ -0.46
TOP3A-220ENST00000585031 SLC17A3O00476 420 aa12.18□□□□□ -0.46
TOP3A-220ENST00000585031 GCGP01275 180 aa12.18□□□□□ -0.46
TOP3A-220ENST00000585031 PLA2G1BP04054 148 aaKnown RBP12.18□□□□□ -0.46
TOP3A-220ENST00000585031 MGST1P10620 155 aaKnown RBP12.18□□□□□ -0.46
TOP3A-220ENST00000585031 GOLT1AQ6ZVE7 132 aa12.18□□□□□ -0.46
TOP3A-220ENST00000585031 TMEM75Q8N9X5 138 aa12.18□□□□□ -0.46
TOP3A-220ENST00000585031 IMMP2LQ96T52 175 aa12.18□□□□□ -0.46
TOP3A-220ENST00000585031 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
TOP3A-220ENST00000585031 TRAV34A0A0B4J273 112 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 K7EN84 100 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 ELOBQ15370 118 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 YPEL4Q96NS1 127 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 ZNF331Q9NQX6 463 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-220ENST00000585031 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 RNF213Q63HN8 5207 aa12.17□□□□□ -0.46
TOP3A-220ENST00000585031 LRCOL1A6NCL2 159 aa12.16□□□□□ -0.46
TOP3A-220ENST00000585031 SNURFLB1AK76 121 aa12.16□□□□□ -0.46
TOP3A-220ENST00000585031 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
TOP3A-220ENST00000585031 RAB5AP20339 215 aa12.16□□□□□ -0.46
TOP3A-220ENST00000585031 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
TOP3A-220ENST00000585031 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
TOP3A-220ENST00000585031 Q86TA4 180 aa12.16□□□□□ -0.46
TOP3A-220ENST00000585031 MRPL53Q96EL3 112 aaKnown RBP12.16□□□□□ -0.46
TOP3A-220ENST00000585031 IGLV5-52A0A0A0MRZ9 124 aa12.15□□□□□ -0.46
TOP3A-220ENST00000585031 LTAP01374 205 aa12.15□□□□□ -0.46
TOP3A-220ENST00000585031 IGLV2-8P01709 118 aa12.15□□□□□ -0.46
TOP3A-220ENST00000585031 FLI1Q01543 452 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-220ENST00000585031 C20orf144Q9BQM9 153 aa12.15□□□□□ -0.46
TOP3A-220ENST00000585031 MSRB1Q9NZV6 116 aa12.15□□□□□ -0.46
TOP3A-220ENST00000585031 ZFP30Q9Y2G7 519 aa12.15□□□□□ -0.46
TOP3A-220ENST00000585031 TRBV24-1A0A075B6N3 115 aa12.14□□□□□ -0.47
TOP3A-220ENST00000585031 J3KRW8 73 aa12.14□□□□□ -0.47
TOP3A-220ENST00000585031 ZNF324O75467 553 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-220ENST00000585031 PFN1P07737 140 aaKnown RBP12.14□□□□□ -0.47
TOP3A-220ENST00000585031 RPL19P84098 196 aaKnown RBP12.14□□□□□ -0.47
TOP3A-220ENST00000585031 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms