RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 CSNK1G2-AS1Q8NCQ2 148 aa13.23□□□□□ -0.29
NDEL1-217ENST00000583683 SMIM27A0A1W2PRY6 76 aa13.23□□□□□ -0.29
NDEL1-217ENST00000583683 TDRG1Q3Y452 100 aa13.23□□□□□ -0.29
NDEL1-217ENST00000583683 C1orf158Q8N1D5 194 aa13.23□□□□□ -0.29
NDEL1-217ENST00000583683 GTSF1Q8WW33 167 aa13.23□□□□□ -0.29
NDEL1-217ENST00000583683 DNAH3Q8TD57 4116 aa13.22□□□□□ -0.29
NDEL1-217ENST00000583683 A8MZ25 164 aa13.22□□□□□ -0.29
NDEL1-217ENST00000583683 TCL1AP56279 114 aa13.22□□□□□ -0.29
NDEL1-217ENST00000583683 MRPL52Q86TS9 123 aaKnown RBP13.22□□□□□ -0.29
NDEL1-217ENST00000583683 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.29
NDEL1-217ENST00000583683 RPS20P60866 119 aaKnown RBP13.21□□□□□ -0.29
NDEL1-217ENST00000583683 KIR2DL5BQ8NHK3 375 aa13.21□□□□□ -0.29
NDEL1-217ENST00000583683 GFRA4Q9GZZ7 299 aa13.21□□□□□ -0.29
NDEL1-217ENST00000583683 IGHV1OR15-1A0A075B7D0 117 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 KCNS1Q96KK3 526 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 HIGD1CA8MV81 97 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 GNRH2O43555 120 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 PRB2P02812 416 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-217ENST00000583683 APOC4P55056 127 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 TMEM256Q8N2U0 113 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 SNHG12Q9BXW3 62 aa13.2□□□□□ -0.3
NDEL1-217ENST00000583683 FOXA3P55318 350 aaPredicted RBP13.19□□□□□ -0.3
NDEL1-217ENST00000583683 LINC01587Q99440 93 aa13.19□□□□□ -0.3
NDEL1-217ENST00000583683 NAT8BQ9UHF3 227 aa13.19□□□□□ -0.3
NDEL1-217ENST00000583683 TP53TG3Q9ULZ0 132 aa13.19□□□□□ -0.3
NDEL1-217ENST00000583683 PRM2P04554 102 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 IGLC6P0CF74 106 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 BTF3P20290 206 aaKnown RBP13.18□□□□□ -0.3
NDEL1-217ENST00000583683 NUP35Q8NFH5 326 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 TMEM208Q9BTX3 173 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 IGHV3OR16-12A0A075B7B8 117 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 HTN1P15515 57 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 RAB4AP20338 218 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 LINC00467Q9BRT7 94 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
NDEL1-217ENST00000583683 M0R143 59 aa13.17□□□□□ -0.3
NDEL1-217ENST00000583683 ZNF705AQ6ZN79 300 aaPredicted RBP13.17□□□□□ -0.3
NDEL1-217ENST00000583683 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
NDEL1-217ENST00000583683 TRAPPC1Q9Y5R8 145 aa13.17□□□□□ -0.3
NDEL1-217ENST00000583683 CBY3A6NI87 242 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 FRMD6-AS1P0C7T7 363 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 ESDP10768 282 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 ASIPP42127 132 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 PGLYRP4Q96LB8 373 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 TPPP3Q9BW30 176 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 TRAV9-1A0A075B6T8 112 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 K7EIL1 84 aa13.16□□□□□ -0.3
NDEL1-217ENST00000583683 RNASE3P12724 160 aaKnown RBP13.16□□□□□ -0.3
NDEL1-217ENST00000583683 SSBP4Q9BWG4 385 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-217ENST00000583683 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
NDEL1-217ENST00000583683 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.3
NDEL1-217ENST00000583683 H3BVH4 76 aa13.15□□□□□ -0.3
NDEL1-217ENST00000583683 CTRLP40313 264 aa13.15□□□□□ -0.3
NDEL1-217ENST00000583683 LYZL1Q6UWQ5 148 aa13.15□□□□□ -0.3
NDEL1-217ENST00000583683 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
NDEL1-217ENST00000583683 SPINK4O60575 86 aa13.14□□□□□ -0.31
NDEL1-217ENST00000583683 ARMS2P0C7Q2 107 aa13.14□□□□□ -0.31
NDEL1-217ENST00000583683 S100A4P26447 101 aaKnown RBP13.14□□□□□ -0.31
NDEL1-217ENST00000583683 DEFB135Q30KP9 77 aa13.14□□□□□ -0.31
NDEL1-217ENST00000583683 TRGV11A0A075B6L2 103 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 SNAI2O43623 268 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 SCGB1D1O95968 90 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 OR5AL1P0C617 328 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 AZU1P20160 251 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 MUC4Q99102 2169 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 F2Z2F3 143 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 NUPR1O60356 82 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 MED14OSP0DP75 135 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 Q6ZWC4 215 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 SCRT2Q9NQ03 307 aa13.13□□□□□ -0.31
NDEL1-217ENST00000583683 MUC21A0A0G2JKD1 596 aa13.12□□□□□ -0.31
NDEL1-217ENST00000583683 MUC21A0A140T8X8 626 aa13.12□□□□□ -0.31
NDEL1-217ENST00000583683 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
NDEL1-217ENST00000583683 CNFNQ9BYD5 112 aa13.12□□□□□ -0.31
NDEL1-217ENST00000583683 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
NDEL1-217ENST00000583683 SPRY2O43597 315 aa13.11□□□□□ -0.31
NDEL1-217ENST00000583683 C11orf72Q8NBR9 251 aa13.11□□□□□ -0.31
NDEL1-217ENST00000583683 OR10AG1Q8NH19 301 aa13.11□□□□□ -0.31
NDEL1-217ENST00000583683 RNASE8Q8TDE3 154 aaKnown RBP13.11□□□□□ -0.31
NDEL1-217ENST00000583683 C9orf85Q96MD7 179 aa13.11□□□□□ -0.31
NDEL1-217ENST00000583683 A0A1B0GUT8 65 aa13.11□□□□□ -0.31
NDEL1-217ENST00000583683 MRPL54Q6P161 138 aaKnown RBP13.11□□□□□ -0.31
NDEL1-217ENST00000583683 RCHY1Q96PM5 261 aa13.11□□□□□ -0.31
NDEL1-217ENST00000583683 LINC00310P59036 64 aa13.1□□□□□ -0.31
NDEL1-217ENST00000583683 TMEM263Q8WUH6 116 aaKnown RBP13.1□□□□□ -0.31
NDEL1-217ENST00000583683 X6R8D5 127 aa13.1□□□□□ -0.31
NDEL1-217ENST00000583683 ZNF415Q09FC8 603 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 ATP5L2Q7Z4Y8 100 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 RNF183Q96D59 192 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 PHLDA3Q9Y5J5 127 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 A0A1B0GXF2 115 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 NTF3P20783 257 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 GAGE1Q13065 139 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 BORCS7Q96B45 105 aa13.09□□□□□ -0.31
NDEL1-217ENST00000583683 Q0VG73 95 aa13.08□□□□□ -0.32
NDEL1-217ENST00000583683 DEFB121Q5J5C9 76 aa13.08□□□□□ -0.32
NDEL1-217ENST00000583683 MIEN1Q9BRT3 115 aa13.08□□□□□ -0.32
NDEL1-217ENST00000583683 MSRB1Q9NZV6 116 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms