RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 HTN1P15515 57 aa10.65□□□□□ -0.71
SENP3-208ENST00000583277 ZNF705AQ6ZN79 300 aaPredicted RBP10.65□□□□□ -0.71
SENP3-208ENST00000583277 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.71
SENP3-208ENST00000583277 C9orf85Q96MD7 179 aa10.65□□□□□ -0.71
SENP3-208ENST00000583277 TIMM8BQ9Y5J9 83 aaPredicted RBP10.65□□□□□ -0.71
SENP3-208ENST00000583277 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
SENP3-208ENST00000583277 HLA-DQA1P01909 254 aa10.64□□□□□ -0.71
SENP3-208ENST00000583277 CAMPP49913 170 aa10.64□□□□□ -0.71
SENP3-208ENST00000583277 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
SENP3-208ENST00000583277 ZFP82Q8N141 532 aa10.64□□□□□ -0.71
SENP3-208ENST00000583277 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
SENP3-208ENST00000583277 SNURFLB1AK76 121 aa10.63□□□□□ -0.71
SENP3-208ENST00000583277 NXPH4O95158 308 aa10.63□□□□□ -0.71
SENP3-208ENST00000583277 RAB4BP61018 213 aa10.63□□□□□ -0.71
SENP3-208ENST00000583277 TWIST1Q15672 202 aa10.63□□□□□ -0.71
SENP3-208ENST00000583277 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
SENP3-208ENST00000583277 MUC4Q99102 2169 aa10.63□□□□□ -0.71
SENP3-208ENST00000583277 MUC21A0A0G2JKD1 596 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 MUC21A0A140T8X8 626 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 NTF3P20783 257 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 ZNF493Q6ZR52 646 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 TMEM136Q6ZRR5 245 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 SYT8Q8NBV8 401 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 TRAPPC1Q9Y5R8 145 aa10.62□□□□□ -0.71
SENP3-208ENST00000583277 FRMD6-AS1P0C7T7 363 aa10.61□□□□□ -0.71
SENP3-208ENST00000583277 SMIM15Q7Z3B0 74 aa10.61□□□□□ -0.71
SENP3-208ENST00000583277 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
SENP3-208ENST00000583277 FRZBQ92765 325 aa10.61□□□□□ -0.71
SENP3-208ENST00000583277 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
SENP3-208ENST00000583277 SMIM9A6NGZ8 99 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 M0R381 172 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 TRGC1P0CF51 173 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 RRN3P1Q2M238 152 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 Q6ZWC4 215 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 C11orf72Q8NBR9 251 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 SPXQ9BT56 116 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 DNHD1Q96M86 4753 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 C1orf196B1AJZ1 125 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 TRGC2P03986 189 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 SSTP61278 116 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 PTH2Q96A98 100 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 AP1S3Q96PC3 154 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 RCHY1Q96PM5 261 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 MRPL18Q9H0U6 180 aaKnown RBP10.6□□□□□ -0.71
SENP3-208ENST00000583277 GSN-AS1Q9NRJ2 163 aa10.6□□□□□ -0.71
SENP3-208ENST00000583277 NBEAL2Q6ZNJ1 2754 aa10.59□□□□□ -0.71
SENP3-208ENST00000583277 M0R2P5 195 aa10.59□□□□□ -0.71
SENP3-208ENST00000583277 PIK3CD-AS1Q5SR53 167 aa10.59□□□□□ -0.71
SENP3-208ENST00000583277 IL17DQ8TAD2 202 aa10.59□□□□□ -0.71
SENP3-208ENST00000583277 APCSP02743 223 aa10.58□□□□□ -0.72
SENP3-208ENST00000583277 PRM2P04554 102 aa10.58□□□□□ -0.72
SENP3-208ENST00000583277 AZU1P20160 251 aa10.58□□□□□ -0.72
SENP3-208ENST00000583277 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
SENP3-208ENST00000583277 DMRTA1Q5VZB9 504 aa10.58□□□□□ -0.72
SENP3-208ENST00000583277 NDUFAF3Q9BU61 184 aa10.58□□□□□ -0.72
SENP3-208ENST00000583277 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
SENP3-208ENST00000583277 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
SENP3-208ENST00000583277 RNF183Q96D59 192 aa10.57□□□□□ -0.72
SENP3-208ENST00000583277 FBN3Q75N90 2809 aa10.57□□□□□ -0.72
SENP3-208ENST00000583277 PHOX2AO14813 284 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 SPRY2O43597 315 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 RAB5BP61020 215 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 DAZ2Q13117 558 aaKnown RBP10.56□□□□□ -0.72
SENP3-208ENST00000583277 SLAQ13239 276 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 TP53TG1Q9Y2A0 90 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 X6R8D5 127 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 EVI2AP22794 236 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 OR11H2Q8NH07 326 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 DPH3P1Q9H4G8 78 aa10.56□□□□□ -0.72
SENP3-208ENST00000583277 K7EIL1 84 aa10.55□□□□□ -0.72
SENP3-208ENST00000583277 LGALS9BQ3B8N2 356 aa10.55□□□□□ -0.72
SENP3-208ENST00000583277 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
SENP3-208ENST00000583277 A8MWV9 139 aa10.54□□□□□ -0.72
SENP3-208ENST00000583277 MIFP14174 115 aa10.54□□□□□ -0.72
SENP3-208ENST00000583277 AMN1Q8IY45 258 aa10.54□□□□□ -0.72
SENP3-208ENST00000583277 RASL10AQ92737 203 aa10.54□□□□□ -0.72
SENP3-208ENST00000583277 PRB2P02812 416 aaPredicted RBP10.53□□□□□ -0.72
SENP3-208ENST00000583277 C14orf178Q8N769 122 aaPredicted RBP10.53□□□□□ -0.72
SENP3-208ENST00000583277 OVOL2Q9BRP0 275 aa10.53□□□□□ -0.72
SENP3-208ENST00000583277 TMA7Q9Y2S6 64 aaKnown RBP10.53□□□□□ -0.72
SENP3-208ENST00000583277 TRGV1A0A0A0MS02 117 aa10.52□□□□□ -0.72
SENP3-208ENST00000583277 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.72
SENP3-208ENST00000583277 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.72
SENP3-208ENST00000583277 PPBPP02775 128 aa10.52□□□□□ -0.73
SENP3-208ENST00000583277 RAB4AP20338 218 aa10.52□□□□□ -0.73
SENP3-208ENST00000583277 KIAA1644Q3SXP7 199 aa10.52□□□□□ -0.73
SENP3-208ENST00000583277 MRPL51Q4U2R6 128 aaKnown RBP10.52□□□□□ -0.73
SENP3-208ENST00000583277 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
SENP3-208ENST00000583277 RHODO00212 210 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BKO60814 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BJP06899 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BOP23527 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 SRIP30626 198 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BBP33778 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BDP58876 126 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms