RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 KCPQ6ZWJ8 1503 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 A0A0G2JMM0 328 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 TRBV10-1A0A0K0K1A3 114 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 TEX49A0A1B0GTD5 131 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 NUPR2A6NF83 97 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 ZNF727A8MUV8 499 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 M0QZK8 103 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 TPST1O60507 370 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 SLC25A5P05141 298 aaKnown RBP0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 TSPAN19P0C672 248 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 AKR1D1P51857 326 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 POLR2JP52435 117 aaKnown RBP0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 CAV3P56539 151 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 RPL37AP61513 92 aaKnown RBP0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 SNRPD3P62318 126 aaKnown RBP0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 SMCO1Q147U7 214 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 SPINK13Q1W4C9 94 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 Q5XG85 94 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 XAF1Q6GPH4 301 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 UNQ5815/PRO19632Q6UWF5 114 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 ATP11AUNQ6ZP68 121 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 SBSPONQ8IVN8 264 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 ATP6V0E2Q8NHE4 81 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 ATG5Q9H1Y0 275 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 BANF2Q9H503 90 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 NIT2Q9NQR4 276 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 COPZ2Q9P299 210 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 ERG28Q9UKR5 140 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 ADGRB1O14514 1584 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 AHCTF1Q8WYP5 2266 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 TNS1Q9HBL0 1735 aaKnown RBP0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 DAPK1P53355 1430 aa0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 PRG4Q92954 1404 aaPredicted RBP0.3□□□□□ -2.36
SMCHD1-206ENST00000581631 TRBV20-1A0A075B6N2 111 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 TRAV12-2A0A075B6T6 113 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 LOC107984156A0A0G2JMH3 177 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 J3QLW9 94 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 K7EIL1 84 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 M0R2P5 195 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 M0R2Z0 102 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 CD3DP04234 171 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 CD14P08571 375 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 MPC1LP0DKB6 136 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 FXYD4P59646 89 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 CKS1BP61024 79 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 SMIM21Q3B7S5 101 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 SPINK9Q5DT21 86 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 TMEM244Q5VVB8 128 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 SCIMPQ6UWF3 145 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 LYPD5Q6UWN5 251 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 SLC25A26Q70HW3 274 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 ARL17AQ8IVW1 177 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 CTAGE3PQ8IX95 158 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 Q8N6K4 173 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 DYNLRB2Q8TF09 96 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 MAFIPQ8WZ33 124 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 TCEAL4Q96EI5 215 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 PFDN5Q99471 154 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 FKBP11Q9NYL4 201 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 COMMD3Q9UBI1 195 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 NOP16Q9Y3C1 178 aaKnown RBP0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 DNAJC15Q9Y5T4 150 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 NAV2Q8IVL1 2488 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 NALCNQ8IZF0 1738 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 MUC22E2RYF6 1773 aaPredicted RBP0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 WNK3Q9BYP7 1800 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 DOCK1Q14185 1865 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 GRIN2AQ12879 1464 aa0.29□□□□□ -2.36
SMCHD1-206ENST00000581631 EIF4G3O43432 1585 aaKnown RBP0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 JMJD1CQ15652 2540 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 LRRC37A3O60309 1634 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 PHLPP1O60346 1717 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 CACNA1CQ13936 2221 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 PIGBOS1A0A0B4J2F0 54 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 A0A1B0GW64 132 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 ARPC5O15511 151 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 MT-ND4LP03901 98 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 COX4I1P13073 169 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 ARPC4P59998 168 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 KLKP1Q107X0 134 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 FXYD3Q14802 87 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 LINC01545Q5VT33 79 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 SNX29P2Q8IUI4 249 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 CCL19Q99731 98 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 LIMD2Q9BT23 127 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 TMEM191AQ9H0A3 160 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 COA4Q9NYJ1 87 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 CCDC167Q9P0B6 97 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 MRPL36Q9P0J6 103 aaKnown RBP0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 PTPRZ1P23471 2315 aaPredicted RBP0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 TMEM2Q9UHN6 1383 aa0.28□□□□□ -2.36
SMCHD1-206ENST00000581631 NAIPQ13075 1403 aa0.28□□□□□ -2.37
SMCHD1-206ENST00000581631 USP24Q9UPU5 2620 aa0.28□□□□□ -2.37
SMCHD1-206ENST00000581631 ZCCHC6Q5VYS8 1495 aaKnown RBP0.28□□□□□ -2.37
SMCHD1-206ENST00000581631 APCP25054 2843 aa0.28□□□□□ -2.37
SMCHD1-206ENST00000581631 CACNA1HO95180 2353 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 PLXNB2O15031 1838 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 CXorf51AA0A1B0GTR3 108 aa0.27□□□□□ -2.37
SMCHD1-206ENST00000581631 LOC105371267A0A1B0GV96 52 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms