RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 H3BMM0 161 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 GPX1P07203 203 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 ARMS2P0C7Q2 107 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 CAMPP49913 170 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 NDUFA6P56556 154 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 RPS20P60866 119 aaKnown RBP4.59□□□□□ -1.67
PTPRM-213ENST00000580949 RAB4BP61018 213 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 SLAQ13239 276 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 ATRQ13535 2644 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 KRTAP24-1Q3LI83 254 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 GFI1BQ5VTD9 330 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 FOXI2Q6ZQN5 318 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 ATP5L2Q7Z4Y8 100 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 CITED1Q99966 193 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 MAP6D1Q9H9H5 199 aa4.59□□□□□ -1.67
PTPRM-213ENST00000580949 A0A1B0GUT8 65 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 OR4C46A6NHA9 309 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 M0R2Z0 102 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 GNRH2O43555 120 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 SAP30O75446 220 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 ZNF324O75467 553 aaPredicted RBP4.58□□□□□ -1.68
PTPRM-213ENST00000580949 DUSP14O95147 198 aaKnown RBP4.58□□□□□ -1.68
PTPRM-213ENST00000580949 IGLV1-51P01701 117 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 APCSP02743 223 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 HLA-DRB4P13762 266 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 CTRLP40313 264 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 SSTP61278 116 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 HBBP68871 147 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 ODF3L2Q3SX64 289 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 Q6AWC8 147 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 EBLN2Q6P2I7 272 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 WDR73Q6P4I2 378 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 RASL11AQ6T310 242 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 FER1L6-AS1Q8NA97 138 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 ODF3Q96PU9 254 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 SPAG8Q99932 426 aaPredicted RBP4.58□□□□□ -1.68
PTPRM-213ENST00000580949 TPPP3Q9BW30 176 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 MSRB1Q9NZV6 116 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 HLA-DRB4X5D2U9 266 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 MAST4O15021 2626 aa4.58□□□□□ -1.68
PTPRM-213ENST00000580949 TRAV12-2A0A075B6T6 113 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 TRAV12-3A0A0B4J271 114 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 TRAV21A0A0B4J279 112 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 XKRY2A2RUG3 117 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 C7orf71A4D174 169 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 F2Z2F3 143 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 UBE2CO00762 179 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 CRXO43186 299 aaPredicted RBP4.57□□□□□ -1.68
PTPRM-213ENST00000580949 NUPR1O60356 82 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 HLA-DQA1P01909 254 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 MT-ND6P03923 174 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 NHLRC4P0CG21 123 aaPredicted RBP4.57□□□□□ -1.68
PTPRM-213ENST00000580949 RBMY1A1P0DJD3 496 aaKnown RBP4.57□□□□□ -1.68
PTPRM-213ENST00000580949 RBMY1CP0DJD4 496 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 LEPP41159 167 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 FXYD7P58549 80 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 RIGQ13278 110 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 RBMY1FQ15415 496 aaKnown RBP4.57□□□□□ -1.68
PTPRM-213ENST00000580949 SPINK13Q1W4C9 94 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 COX19Q49B96 90 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 COA6Q5JTJ3 125 aaKnown RBP4.57□□□□□ -1.68
PTPRM-213ENST00000580949 TMEM256Q8N2U0 113 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 GATD1Q8NB37 220 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 OR10AG1Q8NH19 301 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 NAGKQ9UJ70 344 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 TP53TG3Q9ULZ0 132 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 VWFP04275 2813 aa4.57□□□□□ -1.68
PTPRM-213ENST00000580949 S100A6P06703 90 aa4.56□□□□□ -1.68
PTPRM-213ENST00000580949 NTF3P20783 257 aa4.56□□□□□ -1.68
PTPRM-213ENST00000580949 HIST3H2BBQ8N257 126 aa4.56□□□□□ -1.68
PTPRM-213ENST00000580949 ALKBH7Q9BT30 221 aaPredicted RBP4.56□□□□□ -1.68
PTPRM-213ENST00000580949 CNFNQ9BYD5 112 aa4.56□□□□□ -1.68
PTPRM-213ENST00000580949 SCRT2Q9NQ03 307 aa4.56□□□□□ -1.68
PTPRM-213ENST00000580949 AGRNO00468 2067 aa4.56□□□□□ -1.68
PTPRM-213ENST00000580949 NOTCH3Q9UM47 2321 aa4.56□□□□□ -1.68
PTPRM-213ENST00000580949 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
PTPRM-213ENST00000580949 IGHV4-4A0A075B6R2 117 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 LOC102724200A0A096LPH7 203 aaPredicted RBP4.55□□□□□ -1.68
PTPRM-213ENST00000580949 A0A1B0GW15 77 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 H3BVH4 76 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 SNAI2O43623 268 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 PRM2P04554 102 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 CD7P09564 240 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 GIG44P09565 113 aaPredicted RBP4.55□□□□□ -1.68
PTPRM-213ENST00000580949 OR5AL1P0C617 328 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 RNASE3P12724 160 aaKnown RBP4.55□□□□□ -1.68
PTPRM-213ENST00000580949 TSPOP30536 169 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 CDKN1BP46527 198 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 Q0VG73 95 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 TWIST1Q15672 202 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 DNLZQ5SXM8 178 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 ZNF493Q6ZR52 646 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 OR2K2Q8NGT1 345 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 WFDC10AQ9H1F0 79 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 U3KQK5 164 aa4.55□□□□□ -1.68
PTPRM-213ENST00000580949 IGHV3-16A0A0C4DH30 117 aa4.54□□□□□ -1.68
PTPRM-213ENST00000580949 OR11H12B2RN74 326 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms