RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ID3Q02535 119 aa8.45□□□□□ -1.06
CSNK1D-213ENST00000580446 FAM74A4Q5TZK3 123 aa8.45□□□□□ -1.06
CSNK1D-213ENST00000580446 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
CSNK1D-213ENST00000580446 C12orf45Q8N5I9 185 aaPredicted RBP8.45□□□□□ -1.06
CSNK1D-213ENST00000580446 SMIM8Q96KF7 97 aa8.45□□□□□ -1.06
CSNK1D-213ENST00000580446 HYLS1Q96M11 299 aa8.45□□□□□ -1.06
CSNK1D-213ENST00000580446 PTTG1O95997 202 aa8.44□□□□□ -1.06
CSNK1D-213ENST00000580446 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
CSNK1D-213ENST00000580446 CSN1S1P47710 185 aa8.44□□□□□ -1.06
CSNK1D-213ENST00000580446 ZFP2Q6ZN57 461 aa8.44□□□□□ -1.06
CSNK1D-213ENST00000580446 KCNS1Q96KK3 526 aa8.44□□□□□ -1.06
CSNK1D-213ENST00000580446 FAM167A-AS1Q96KT0 104 aa8.44□□□□□ -1.06
CSNK1D-213ENST00000580446 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
CSNK1D-213ENST00000580446 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
CSNK1D-213ENST00000580446 RBAKDNA6NC62 111 aa8.43□□□□□ -1.06
CSNK1D-213ENST00000580446 ZNF80P51504 273 aaPredicted RBP8.43□□□□□ -1.06
CSNK1D-213ENST00000580446 RBX1P62877 108 aa8.43□□□□□ -1.06
CSNK1D-213ENST00000580446 GAGE6Q13070 117 aa8.43□□□□□ -1.06
CSNK1D-213ENST00000580446 FXYD5Q96DB9 178 aa8.43□□□□□ -1.06
CSNK1D-213ENST00000580446 SGK494Q96LW2 274 aa8.43□□□□□ -1.06
CSNK1D-213ENST00000580446 TSC22D2O75157 780 aa8.42□□□□□ -1.06
CSNK1D-213ENST00000580446 RPS10P46783 165 aaKnown RBP8.42□□□□□ -1.06
CSNK1D-213ENST00000580446 UBE2D3P61077 147 aa8.42□□□□□ -1.06
CSNK1D-213ENST00000580446 UBE2D2P62837 147 aa8.42□□□□□ -1.06
CSNK1D-213ENST00000580446 C15orf56Q8N910 161 aa8.42□□□□□ -1.06
CSNK1D-213ENST00000580446 TREM1Q9NP99 234 aa8.42□□□□□ -1.06
CSNK1D-213ENST00000580446 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
CSNK1D-213ENST00000580446 VBP1P61758 197 aa8.41□□□□□ -1.06
CSNK1D-213ENST00000580446 PPP1R1AQ13522 171 aa8.41□□□□□ -1.06
CSNK1D-213ENST00000580446 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
CSNK1D-213ENST00000580446 SCGB3A2Q96PL1 93 aa8.41□□□□□ -1.06
CSNK1D-213ENST00000580446 SCP2D1Q9UJQ7 156 aa8.41□□□□□ -1.06
CSNK1D-213ENST00000580446 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
CSNK1D-213ENST00000580446 A8MWV9 139 aa8.4□□□□□ -1.06
CSNK1D-213ENST00000580446 MT-ND6P03923 174 aa8.4□□□□□ -1.06
CSNK1D-213ENST00000580446 BAXQ07812 192 aa8.4□□□□□ -1.06
CSNK1D-213ENST00000580446 RETNLBQ9BQ08 111 aa8.4□□□□□ -1.06
CSNK1D-213ENST00000580446 EIF3GO75821 320 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 CST7O76096 145 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 REG3AQ06141 175 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 GOLT1AQ6ZVE7 132 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 SUN5Q8TC36 379 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 DYNC2LI1Q8TCX1 351 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 SMIM4Q8WVI0 70 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 DIRAS2Q96HU8 199 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 MIXL1Q9H2W2 232 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 WDR83OSQ9Y284 106 aa8.39□□□□□ -1.07
CSNK1D-213ENST00000580446 SFT2D2O95562 160 aa8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 KRTAP1-4P0C5Y4 121 aa8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 RPL29P47914 159 aaKnown RBP8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 SSBP1Q04837 148 aaKnown RBP8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 TMEM128Q5BJH2 165 aa8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 PTH2Q96A98 100 aa8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 NMES1Q9C002 83 aa8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 RABL2AQ9UBK7 228 aaPredicted RBP8.38□□□□□ -1.07
CSNK1D-213ENST00000580446 IGLV1-50A0A075B6I6 118 aa8.37□□□□□ -1.07
CSNK1D-213ENST00000580446 UBE2D1P51668 147 aa8.37□□□□□ -1.07
CSNK1D-213ENST00000580446 GNG5P63218 68 aa8.37□□□□□ -1.07
CSNK1D-213ENST00000580446 RPL36AP83881 106 aaKnown RBP8.37□□□□□ -1.07
CSNK1D-213ENST00000580446 MZT2AQ6P582 158 aa8.37□□□□□ -1.07
CSNK1D-213ENST00000580446 RPL36ALQ969Q0 106 aaKnown RBP8.37□□□□□ -1.07
CSNK1D-213ENST00000580446 GGACTQ9BVM4 153 aa8.37□□□□□ -1.07
CSNK1D-213ENST00000580446 ANKRD20A5PA0PJZ0 165 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 C7orf66A4D0T2 115 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 FGF7P21781 194 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 S100A10P60903 97 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 NTM-AS1Q6ZSK4 140 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 FER1L6-AS1Q8NA97 138 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 UQCC1Q9NVA1 299 aa8.36□□□□□ -1.07
CSNK1D-213ENST00000580446 TRBV7-3A0A075B6L6 115 aa8.35□□□□□ -1.07
CSNK1D-213ENST00000580446 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
CSNK1D-213ENST00000580446 CYCSP99999 105 aaKnown RBP8.35□□□□□ -1.07
CSNK1D-213ENST00000580446 ARL6IP6Q8N6S5 226 aa8.35□□□□□ -1.07
CSNK1D-213ENST00000580446 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
CSNK1D-213ENST00000580446 KRTAP4-1Q9BYQ7 146 aa8.35□□□□□ -1.07
CSNK1D-213ENST00000580446 A0A1W2PNN7 141 aa8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 H0Y9J4 135 aa8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 OR7C2O60412 319 aa8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 GCGP01275 180 aa8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 TMED6Q8WW62 240 aa8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 SLIRPQ9GZT3 109 aaKnown RBP8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 GSKIPQ9P0R6 139 aa8.34□□□□□ -1.07
CSNK1D-213ENST00000580446 TRAV1-1A0A0B4J248 108 aa8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 GAGE12HA6NDE8 117 aa8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 H3BVH4 76 aa8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 S100A4P26447 101 aaKnown RBP8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 BCAP31P51572 246 aa8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 PRR27Q6MZM9 219 aa8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 MCFD2Q8NI22 146 aa8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 C15orf40Q8WUR7 153 aa8.33□□□□□ -1.08
CSNK1D-213ENST00000580446 RHODO00212 210 aa8.32□□□□□ -1.08
CSNK1D-213ENST00000580446 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
CSNK1D-213ENST00000580446 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
CSNK1D-213ENST00000580446 C20orf203Q8NBC4 194 aa8.32□□□□□ -1.08
CSNK1D-213ENST00000580446 RAB26Q9ULW5 256 aa8.32□□□□□ -1.08
CSNK1D-213ENST00000580446 IGLV4-60A0A075B6I1 120 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms