RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ORM1P02763 201 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 AKR1C3P42330 323 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 SULT1A2P50226 295 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 TMEM183BQ1AE95 376 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 TDRG1Q3Y452 100 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 Q6ZQT7 251 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 TMEM183AQ8IXX5 376 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 FRZBQ92765 325 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 TVP23CQ96ET8 276 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 FMC1Q96HJ9 113 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 KCNS1Q96KK3 526 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 TXNDC17Q9BRA2 123 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 SPXQ9BT56 116 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 SDF2L1Q9HCN8 221 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 MANBALQ9NQG1 85 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
CCDC40-210ENST00000573903 C9JCJ5 164 aa8.3□□□□□ -1.08
CCDC40-210ENST00000573903 K7EQD1 137 aa8.3□□□□□ -1.08
CCDC40-210ENST00000573903 PFN1P07737 140 aaKnown RBP8.3□□□□□ -1.08
CCDC40-210ENST00000573903 GYPEP15421 78 aa8.3□□□□□ -1.08
CCDC40-210ENST00000573903 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
CCDC40-210ENST00000573903 A0A087WTM6 91 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 TRAV1-1A0A0B4J248 108 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 TRAV34A0A0B4J273 112 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 IFNA1P01562 189 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 DNAH10OSP0CZ25 163 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 FUSP35637 526 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC40-210ENST00000573903 WFDC10BQ8IUB3 73 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 C10orf126Q8N4M7 172 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 ZNF479Q96JC4 524 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 LINC00479Q96M42 142 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 GNG13Q9P2W3 67 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 ZFP30Q9Y2G7 519 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 TNFRSF18Q9Y5U5 241 aa8.29□□□□□ -1.08
CCDC40-210ENST00000573903 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
CCDC40-210ENST00000573903 TRBV6-1A0A0K0K1D8 114 aa8.28□□□□□ -1.08
CCDC40-210ENST00000573903 TYMSP04818 313 aa8.28□□□□□ -1.08
CCDC40-210ENST00000573903 S100A9P06702 114 aaKnown RBP8.28□□□□□ -1.08
CCDC40-210ENST00000573903 INAFM2P0DMQ5 153 aa8.28□□□□□ -1.08
CCDC40-210ENST00000573903 SH2D6Q7Z4S9 175 aa8.28□□□□□ -1.08
CCDC40-210ENST00000573903 RASL10AQ92737 203 aa8.28□□□□□ -1.08
CCDC40-210ENST00000573903 MDFICQ9P1T7 246 aa8.28□□□□□ -1.08
CCDC40-210ENST00000573903 TRAV4A0A0B4J268 109 aa8.27□□□□□ -1.09
CCDC40-210ENST00000573903 SCO2A0A1W2PP80 73 aa8.27□□□□□ -1.09
CCDC40-210ENST00000573903 PSCAO43653 123 aa8.27□□□□□ -1.09
CCDC40-210ENST00000573903 CRYGDP07320 174 aa8.27□□□□□ -1.09
CCDC40-210ENST00000573903 ZNF80P51504 273 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-210ENST00000573903 Q5VSD8 79 aa8.27□□□□□ -1.09
CCDC40-210ENST00000573903 OR4C5Q8NGB2 326 aa8.27□□□□□ -1.09
CCDC40-210ENST00000573903 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
CCDC40-210ENST00000573903 IGHV3-16A0A0C4DH30 117 aa8.26□□□□□ -1.09
CCDC40-210ENST00000573903 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
CCDC40-210ENST00000573903 M0R2P5 195 aa8.26□□□□□ -1.09
CCDC40-210ENST00000573903 LTAP01374 205 aa8.26□□□□□ -1.09
CCDC40-210ENST00000573903 NHLRC2Q8NBF2 726 aa8.26□□□□□ -1.09
CCDC40-210ENST00000573903 GNRH2O43555 120 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 GCSHP23434 173 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 NKX2-5P52952 324 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-210ENST00000573903 XGP55808 180 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 FAM162BQ5T6X4 162 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 ALKAL2Q6UX46 152 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 COX8CQ7Z4L0 72 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 ZC2HC1AQ96GY0 325 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 BOLA1Q9Y3E2 137 aa8.25□□□□□ -1.09
CCDC40-210ENST00000573903 IGHV3-38A0A0C4DH36 116 aa8.24□□□□□ -1.09
CCDC40-210ENST00000573903 BCL2P10415 239 aa8.24□□□□□ -1.09
CCDC40-210ENST00000573903 S100A4P26447 101 aaKnown RBP8.24□□□□□ -1.09
CCDC40-210ENST00000573903 TAGLN2P37802 199 aaKnown RBP8.24□□□□□ -1.09
CCDC40-210ENST00000573903 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
CCDC40-210ENST00000573903 BLOC1S1P78537 153 aa8.24□□□□□ -1.09
CCDC40-210ENST00000573903 CCL20P78556 96 aa8.24□□□□□ -1.09
CCDC40-210ENST00000573903 MEF2BQ02080 365 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-210ENST00000573903 C11orf52Q96A22 123 aa8.24□□□□□ -1.09
CCDC40-210ENST00000573903 C11orf21Q9P2W6 132 aa8.24□□□□□ -1.09
CCDC40-210ENST00000573903 IGLV5-52A0A0A0MRZ9 124 aa8.23□□□□□ -1.09
CCDC40-210ENST00000573903 TRAV8-6A0A0B4J262 113 aa8.23□□□□□ -1.09
CCDC40-210ENST00000573903 B4DEV8 164 aa8.23□□□□□ -1.09
CCDC40-210ENST00000573903 FAM229AH3BQW9 127 aa8.23□□□□□ -1.09
CCDC40-210ENST00000573903 PDE6DO43924 150 aa8.23□□□□□ -1.09
CCDC40-210ENST00000573903 SH2D1AO60880 128 aa8.23□□□□□ -1.09
CCDC40-210ENST00000573903 ASIPP42127 132 aa8.23□□□□□ -1.09
CCDC40-210ENST00000573903 LOC100131303A0A0U1RQF7 123 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 TIRAPP58753 221 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 ZNF674Q2M3X9 581 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 OR10J3Q5JRS4 329 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 BAGE2Q86Y30 109 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 NTN5Q8WTR8 489 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-210ENST00000573903 C9orf85Q96MD7 179 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 PRADC1Q9BSG0 188 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 VAX2Q9UIW0 290 aa8.22□□□□□ -1.09
CCDC40-210ENST00000573903 IGKV3D-20A0A0C4DH25 116 aa8.21□□□□□ -1.1
CCDC40-210ENST00000573903 M0R036 132 aa8.21□□□□□ -1.1
CCDC40-210ENST00000573903 CIDEAO60543 219 aa8.21□□□□□ -1.1
CCDC40-210ENST00000573903 GATA1P15976 413 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-210ENST00000573903 RPL35P42766 123 aaKnown RBP8.21□□□□□ -1.1
CCDC40-210ENST00000573903 RHOHQ15669 191 aa8.21□□□□□ -1.1
CCDC40-210ENST00000573903 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
CCDC40-210ENST00000573903 ZNF876PQ49A33 203 aa8.21□□□□□ -1.1
CCDC40-210ENST00000573903 LINC01556Q5JQF7 62 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms