RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 OR5AC2Q9NZP5 309 aa12.91□□□□□ -0.34
CCDC40-206ENST00000572083 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
CCDC40-206ENST00000572083 Q9UF83 564 aa12.91□□□□□ -0.34
CCDC40-206ENST00000572083 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
CCDC40-206ENST00000572083 LRRC37A5PQ49AS3 106 aa12.9□□□□□ -0.34
CCDC40-206ENST00000572083 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
CCDC40-206ENST00000572083 URGCP-MRPS24S4R325 110 aa12.9□□□□□ -0.34
CCDC40-206ENST00000572083 TNXBP22105 4242 aa12.9□□□□□ -0.34
CCDC40-206ENST00000572083 LRP2P98164 4655 aa12.89□□□□□ -0.35
CCDC40-206ENST00000572083 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
CCDC40-206ENST00000572083 CYB561D1Q8N8Q1 229 aa12.89□□□□□ -0.35
CCDC40-206ENST00000572083 OR2T35Q8NGX2 323 aa12.89□□□□□ -0.35
CCDC40-206ENST00000572083 PARLQ9H300 379 aa12.89□□□□□ -0.35
CCDC40-206ENST00000572083 KLK12Q9UKR0 248 aa12.89□□□□□ -0.35
CCDC40-206ENST00000572083 A0A087WWC5 75 aa12.88□□□□□ -0.35
CCDC40-206ENST00000572083 H2AFB2P0C5Z0 115 aa12.88□□□□□ -0.35
CCDC40-206ENST00000572083 NIT1Q86X76 327 aa12.88□□□□□ -0.35
CCDC40-206ENST00000572083 UBE2WQ96B02 151 aa12.88□□□□□ -0.35
CCDC40-206ENST00000572083 NDFIP1Q9BT67 221 aa12.88□□□□□ -0.35
CCDC40-206ENST00000572083 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
CCDC40-206ENST00000572083 SIX6O95475 246 aa12.87□□□□□ -0.35
CCDC40-206ENST00000572083 GCGP01275 180 aa12.87□□□□□ -0.35
CCDC40-206ENST00000572083 MT1HL1P0DM35 61 aa12.87□□□□□ -0.35
CCDC40-206ENST00000572083 C14orf178Q8N769 122 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-206ENST00000572083 PTH2Q96A98 100 aa12.87□□□□□ -0.35
CCDC40-206ENST00000572083 RNF213Q63HN8 5207 aa12.86□□□□□ -0.35
CCDC40-206ENST00000572083 H0YIZ8 118 aa12.86□□□□□ -0.35
CCDC40-206ENST00000572083 TAAR5O14804 337 aa12.86□□□□□ -0.35
CCDC40-206ENST00000572083 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
CCDC40-206ENST00000572083 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
CCDC40-206ENST00000572083 JPT2Q9H910 190 aa12.85□□□□□ -0.35
CCDC40-206ENST00000572083 A8MWV9 139 aa12.84□□□□□ -0.35
CCDC40-206ENST00000572083 SEC11BP0C7V7 166 aa12.84□□□□□ -0.35
CCDC40-206ENST00000572083 LGALSLQ3ZCW2 172 aaPredicted RBP12.84□□□□□ -0.35
CCDC40-206ENST00000572083 LINC00479Q96M42 142 aa12.84□□□□□ -0.35
CCDC40-206ENST00000572083 HMGB3O15347 200 aaKnown RBP12.83□□□□□ -0.36
CCDC40-206ENST00000572083 PQLC2Q6ZP29 291 aa12.83□□□□□ -0.36
CCDC40-206ENST00000572083 A0A087WX48 190 aa12.82□□□□□ -0.36
CCDC40-206ENST00000572083 FGF8P55075 233 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-206ENST00000572083 C14orf177Q52M58 125 aa12.82□□□□□ -0.36
CCDC40-206ENST00000572083 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
CCDC40-206ENST00000572083 ATRAIDQ6UW56 229 aa12.82□□□□□ -0.36
CCDC40-206ENST00000572083 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
CCDC40-206ENST00000572083 ZFP69Q49AA0 526 aa12.81□□□□□ -0.36
CCDC40-206ENST00000572083 SCGB1C1Q8TD33 95 aa12.81□□□□□ -0.36
CCDC40-206ENST00000572083 PSG8Q9UQ74 426 aa12.81□□□□□ -0.36
CCDC40-206ENST00000572083 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
CCDC40-206ENST00000572083 TCRAP04437 139 aa12.8□□□□□ -0.36
CCDC40-206ENST00000572083 S100A4P26447 101 aaKnown RBP12.8□□□□□ -0.36
CCDC40-206ENST00000572083 RAB2AP61019 212 aa12.8□□□□□ -0.36
CCDC40-206ENST00000572083 SMUG1Q53HV7 270 aa12.8□□□□□ -0.36
CCDC40-206ENST00000572083 PRNTQ86SH4 94 aa12.8□□□□□ -0.36
CCDC40-206ENST00000572083 C1orf43Q9BWL3 253 aa12.8□□□□□ -0.36
CCDC40-206ENST00000572083 HSPB11Q9Y547 144 aa12.8□□□□□ -0.36
CCDC40-206ENST00000572083 FAM240BA0A1B0GVZ2 78 aa12.79□□□□□ -0.36
CCDC40-206ENST00000572083 SERTM2A0A1B0GWG4 89 aa12.79□□□□□ -0.36
CCDC40-206ENST00000572083 ELOBQ15370 118 aa12.79□□□□□ -0.36
CCDC40-206ENST00000572083 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
CCDC40-206ENST00000572083 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
CCDC40-206ENST00000572083 OR10G9Q8NGN4 311 aa12.79□□□□□ -0.36
CCDC40-206ENST00000572083 IGKV3D-20A0A0C4DH25 116 aa12.78□□□□□ -0.36
CCDC40-206ENST00000572083 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
CCDC40-206ENST00000572083 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
CCDC40-206ENST00000572083 C5orf17Q8NAS9 161 aa12.78□□□□□ -0.36
CCDC40-206ENST00000572083 OR2G3Q8NGZ4 309 aa12.78□□□□□ -0.36
CCDC40-206ENST00000572083 CHCHD7Q9BUK0 85 aa12.78□□□□□ -0.36
CCDC40-206ENST00000572083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.78□□□□□ -0.36
CCDC40-206ENST00000572083 K7EQM0 130 aa12.77□□□□□ -0.37
CCDC40-206ENST00000572083 Q0VG73 95 aa12.77□□□□□ -0.37
CCDC40-206ENST00000572083 PIK3CD-AS1Q5SR53 167 aa12.77□□□□□ -0.37
CCDC40-206ENST00000572083 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.37
CCDC40-206ENST00000572083 USP17L23D6RBM5 183 aa12.76□□□□□ -0.37
CCDC40-206ENST00000572083 PANO1I0J062 215 aa12.76□□□□□ -0.37
CCDC40-206ENST00000572083 HLA-DQA1P01909 254 aa12.76□□□□□ -0.37
CCDC40-206ENST00000572083 ASIPP42127 132 aa12.76□□□□□ -0.37
CCDC40-206ENST00000572083 ENHOQ6UWT2 76 aa12.76□□□□□ -0.37
CCDC40-206ENST00000572083 PPP1R1CQ8WVI7 109 aa12.76□□□□□ -0.37
CCDC40-206ENST00000572083 H3BVH4 76 aa12.75□□□□□ -0.37
CCDC40-206ENST00000572083 CRPP02741 224 aa12.75□□□□□ -0.37
CCDC40-206ENST00000572083 PRSS1P07477 247 aa12.75□□□□□ -0.37
CCDC40-206ENST00000572083 Q6ZRU5 148 aa12.75□□□□□ -0.37
CCDC40-206ENST00000572083 OR10G7Q8NGN6 311 aa12.75□□□□□ -0.37
CCDC40-206ENST00000572083 RHODO00212 210 aa12.74□□□□□ -0.37
CCDC40-206ENST00000572083 WFDC1Q9HC57 220 aa12.74□□□□□ -0.37
CCDC40-206ENST00000572083 IL36BQ9NZH7 164 aa12.74□□□□□ -0.37
CCDC40-206ENST00000572083 A0A087WWL8 130 aa12.73□□□□□ -0.37
CCDC40-206ENST00000572083 TMEM262E9PQX1 116 aa12.73□□□□□ -0.37
CCDC40-206ENST00000572083 RPL12P30050 165 aaKnown RBP12.73□□□□□ -0.37
CCDC40-206ENST00000572083 H2BFSP57053 126 aa12.73□□□□□ -0.37
CCDC40-206ENST00000572083 CYCSP99999 105 aaKnown RBP12.73□□□□□ -0.37
CCDC40-206ENST00000572083 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
CCDC40-206ENST00000572083 CDC34P49427 236 aaPredicted RBP12.72□□□□□ -0.37
CCDC40-206ENST00000572083 SUMO1P63165 101 aaKnown RBP12.72□□□□□ -0.37
CCDC40-206ENST00000572083 MPV17L2Q567V2 206 aa12.72□□□□□ -0.37
CCDC40-206ENST00000572083 C9orf163Q8N9P6 203 aa12.72□□□□□ -0.37
CCDC40-206ENST00000572083 ZC2HC1AQ96GY0 325 aa12.72□□□□□ -0.37
CCDC40-206ENST00000572083 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
CCDC40-206ENST00000572083 B4DEV8 164 aa12.71□□□□□ -0.37
CCDC40-206ENST00000572083 STAG3L2P0CL84 134 aa12.71□□□□□ -0.37
CCDC40-206ENST00000572083 STAG3L3P0CL85 134 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms