RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CST7O76096 145 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 NDUFC2O95298 119 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 NCR2O95944 276 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 IGKCP01834 107 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 COX6A1P12074 109 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 COL8A2P25067 703 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 HLA-DMBP28068 263 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 RTL8BQ17RB0 113 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 VMA21Q3ZAQ7 101 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 FAM201AQ5SY85 155 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 OR10AC1Q8NH08 325 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 Q96M85 177 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 LINC00574Q9H8X3 128 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 SIP14410 1827 aa3.33□□□□□ -1.88
UBR1-208ENST00000569066 NUP210Q8TEM1 1887 aaPredicted RBP3.33□□□□□ -1.88
UBR1-208ENST00000569066 SLC25A16P16260 332 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 MORN3Q6PF18 240 aaPredicted RBP3.32□□□□□ -1.88
UBR1-208ENST00000569066 DAZ4Q86SG3 579 aaKnown RBP3.32□□□□□ -1.88
UBR1-208ENST00000569066 AMN1Q8IY45 258 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 MRPL20Q9BYC9 149 aaKnown RBP3.32□□□□□ -1.88
UBR1-208ENST00000569066 DAZ1Q9NQZ3 744 aaKnown RBP3.32□□□□□ -1.88
UBR1-208ENST00000569066 FANCMQ8IYD8 2048 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 GPR179Q6PRD1 2367 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 LOC730098B7Z3J9 87 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 LGALS9O00182 355 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 LYZL6O75951 148 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 LTAP01374 205 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 IGKV1D-33P01593 117 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 IGKV1-33P01594 117 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 GYPBP06028 91 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 PEBP1P30086 187 aaKnown RBP3.32□□□□□ -1.88
UBR1-208ENST00000569066 SS18Q15532 418 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 GDF5OSQ5U4N7 250 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 LYZL2Q7Z4W2 148 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 SLC22A24Q8N4F4 322 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 IGF2BP2-AS1Q96M15 143 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 ZNF286AQ9HBT8 521 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 RBM12B-AS1Q9P1G2 102 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 KLF13Q9Y2Y9 288 aaPredicted RBP3.32□□□□□ -1.88
UBR1-208ENST00000569066 AMMECR1Q9Y4X0 333 aaPredicted RBP3.32□□□□□ -1.88
UBR1-208ENST00000569066 LOC285556D6RIA3 1793 aa3.32□□□□□ -1.88
UBR1-208ENST00000569066 PTPRSQ13332 1948 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 IGLV4-60A0A075B6I1 120 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 IGHV1-3A0A0C4DH29 117 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 A8MWV9 139 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 H3BSH0 61 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 EPPINO95925 133 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 PYYP10082 97 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 PSMB2P49721 201 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 C22orf39Q6P5X5 142 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 Q6ZRU5 148 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 RPP25LQ8N5L8 163 aaKnown RBP3.31□□□□□ -1.88
UBR1-208ENST00000569066 FMC1Q96HJ9 113 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 EPDR1Q9UM22 224 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 V9GYV3 84 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 RALGAPA2Q2PPJ7 1873 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 GOLGB1Q14789 3259 aaKnown RBP3.31□□□□□ -1.88
UBR1-208ENST00000569066 STRCP1A6NGW2 1772 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 TRAV41A0A0B4J266 112 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 TRAV17A0A0B4J275 112 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 C19orf71A6NCJ1 209 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 SSSCA1O60232 199 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 PDCD6O75340 191 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 P0DMU3 169 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 FAM231AP0DMU4 169 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 FAM231CP0DMU5 169 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 CCL1P22362 96 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 CST6Q15828 149 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 ORMDL3Q8N138 153 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 GPX7Q96SL4 187 aaPredicted RBP3.31□□□□□ -1.88
UBR1-208ENST00000569066 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
UBR1-208ENST00000569066 TEX50A0A1B0GTY4 177 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 FKBP1AP62942 108 aaKnown RBP3.3□□□□□ -1.88
UBR1-208ENST00000569066 ZNF56Q15929 161 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 FBXL19-AS1Q494R0 122 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 RNF182Q8N6D2 247 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 PROK2Q9HC23 129 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 MYO16Q9Y6X6 1858 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 CRYM-AS1A6NIL9 109 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 H3BT86 120 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 H3BVH4 76 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 IL4P05112 153 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 GCHFRP30047 84 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 TMEM155Q4W5P6 130 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 UNQ9165/PRO28630Q6UXU0 137 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 MYOZ3Q8TDC0 251 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 IMUPQ9GZP8 106 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 AICDAQ9GZX7 198 aa3.3□□□□□ -1.88
UBR1-208ENST00000569066 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
UBR1-208ENST00000569066 ESPL1Q14674 2120 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 TRBV25-1A0A075B6N4 114 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 A8MUU9 505 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 PPYP01298 95 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 ATP5G1P05496 136 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 CRYGSP22914 178 aa3.29□□□□□ -1.88
UBR1-208ENST00000569066 UBE2D3P61077 147 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms