RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ANAPC1Q9H1A4 1944 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 FBN1P35555 2871 aaKnown RBP1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 NOTCH1P46531 2555 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 SHROOM3Q8TF72 1996 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 UBR2Q8IWV8 1755 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 A0A1W2PNM2 257 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 OR51F1A6NGY5 319 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF727A8MUV8 499 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF670-ZNF695F2Z2N8 137 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 F6UZH7 168 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 M0R233 179 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 UQCRQO14949 82 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 LYRM1O43325 122 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 CLPSP04118 112 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 CTSDP07339 412 aaPredicted RBP1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 TSPAN19P0C672 248 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 FABP4P15090 132 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 PEBP1P30086 187 aaKnown RBP1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 LSM3P62310 102 aaKnown RBP1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 SNRPD3P62318 126 aaKnown RBP1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 BLCAPP62952 87 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 MRPS36P82909 103 aaKnown RBP1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF345Q14585 488 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 LY6EQ16553 131 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 GLIPR1L1Q6UWM5 242 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 DEFB128Q7Z7B8 93 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 DIRC1Q969H9 104 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 LINC00167Q96N53 147 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 MCEEQ96PE7 176 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 TPRKBQ9Y3C4 175 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 WDFY3Q8IZQ1 3526 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 DOPEY2Q9Y3R5 2298 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 SEC16AO15027 2179 aa1.91□□□□□ -2.1
HERPUD1-211ENST00000566550 NF1P21359 2839 aa1.9□□□□□ -2.1
HERPUD1-211ENST00000566550 ZFC3H1O60293 1989 aaKnown RBP1.9□□□□□ -2.1
HERPUD1-211ENST00000566550 TRIOO75962 3097 aa1.9□□□□□ -2.1
HERPUD1-211ENST00000566550 STAB1Q9NY15 2570 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 RTL9Q8NET4 1388 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 TRAV27A0A087WT01 109 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 LOC107984156A0A0G2JMH3 177 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 BBIP1A8MTZ0 92 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 A8MU10 97 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 ODF3BA8MYP8 253 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 SNAPC5O75971 98 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 FUSP35637 526 aaKnown RBP eCLIP1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 LINC00315P59091 139 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 RPL26P61254 145 aaKnown RBP1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 PCBD1P61457 104 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 SS18Q15532 418 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 CLLU1Q5K131 121 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 IDO2Q6ZQW0 420 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 ARL17AQ8IVW1 177 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 TCTEX1D1Q8N7M0 179 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 LINC00301Q8NCQ3 95 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 POP5Q969H6 163 aaKnown RBP1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 TCEAL7Q9BRU2 100 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 RPL26L1Q9UNX3 145 aaKnown RBP1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 SOX21Q9Y651 276 aaPredicted RBP1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 MALRD1Q5VYJ5 2156 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 COL12A1Q99715 3063 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 FANCMQ8IYD8 2048 aa1.9□□□□□ -2.11
HERPUD1-211ENST00000566550 JMJD1CQ15652 2540 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 IGKV2D-26A0A0A0MRZ7 120 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 A0A0G2JMM0 328 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 A0A1W2PPB8 328 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 LRCOL1A6NCL2 159 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 KIR3DP1A8MWS1 328 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 B4DSR2 109 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 OR1I1O60431 355 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 CRPP02741 224 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 SLC25A4P12235 298 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 HIST1H1BP16401 226 aaKnown RBP1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 MRPS10P82664 201 aaKnown RBP1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 QRFPP83859 136 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 CIRBPQ14011 172 aaKnown RBP1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 TMEM155Q4W5P6 130 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 OCIAD2Q56VL3 154 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 LCE3CQ5T5A8 94 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 HAGHLQ6PII5 290 aaPredicted RBP1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 TMEM91Q6ZNR0 172 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 OR5D14Q8NGL3 314 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 CMTM2Q8TAZ6 248 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 CLEC2BQ92478 149 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 OR4C12Q96R67 309 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 PDCD10Q9BUL8 212 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 CXCL16Q9H2A7 254 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 ARID1AO14497 2285 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 MYOM3Q5VTT5 1437 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 NBEAL1Q6ZS30 2694 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 BRWD1Q9NSI6 2320 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 NUP98P52948 1817 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 TANC2Q9HCD6 1990 aa1.89□□□□□ -2.11
HERPUD1-211ENST00000566550 ARAP2Q8WZ64 1704 aa1.88□□□□□ -2.11
HERPUD1-211ENST00000566550 KIAA2026Q5HYC2 2103 aa1.88□□□□□ -2.11
HERPUD1-211ENST00000566550 NBPF19A0A087WUL8 3843 aa1.88□□□□□ -2.11
HERPUD1-211ENST00000566550 C17orf112F2Z3M2 114 aa1.88□□□□□ -2.11
HERPUD1-211ENST00000566550 CDC42EP2O14613 210 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms