RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 H3BVH4 76 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 GIG44P09565 113 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 KIR2DL5AQ8N109 375 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 GATD1Q8NB37 220 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 KIR2DL5BQ8NHK3 375 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 TMEM208Q9BTX3 173 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 TRAPPC1Q9Y5R8 145 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 IGHV3-16A0A0C4DH30 117 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 CBY3A6NI87 242 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 SNURFLB1AK76 121 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 RNASE3P12724 160 aaKnown RBP13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 CAMPP49913 170 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 APOC4P55056 127 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 TMEM136Q6ZRR5 245 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 C1orf158Q8N1D5 194 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 TP53TG3Q9ULZ0 132 aa13.89□□□□□ -0.19
CSPG4P13-201ENST00000565545 TRGC2P03986 189 aa13.88□□□□□ -0.19
CSPG4P13-201ENST00000565545 NTF3P20783 257 aa13.88□□□□□ -0.19
CSPG4P13-201ENST00000565545 RAB4BP61018 213 aa13.88□□□□□ -0.19
CSPG4P13-201ENST00000565545 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
CSPG4P13-201ENST00000565545 PHLDA3Q9Y5J5 127 aa13.88□□□□□ -0.19
CSPG4P13-201ENST00000565545 RYR3Q15413 4870 aa13.88□□□□□ -0.19
CSPG4P13-201ENST00000565545 A8MZ25 164 aa13.87□□□□□ -0.19
CSPG4P13-201ENST00000565545 FRMD6-AS1P0C7T7 363 aa13.87□□□□□ -0.19
CSPG4P13-201ENST00000565545 RAB5BP61020 215 aa13.87□□□□□ -0.19
CSPG4P13-201ENST00000565545 TWIST1Q15672 202 aa13.87□□□□□ -0.19
CSPG4P13-201ENST00000565545 SPANXN1Q5VSR9 72 aa13.87□□□□□ -0.19
CSPG4P13-201ENST00000565545 ZNF493Q6ZR52 646 aa13.87□□□□□ -0.19
CSPG4P13-201ENST00000565545 CSNK1G2-AS1Q8NCQ2 148 aa13.87□□□□□ -0.19
CSPG4P13-201ENST00000565545 ZFP82Q8N141 532 aa13.86□□□□□ -0.19
CSPG4P13-201ENST00000565545 OR10AG1Q8NH19 301 aa13.86□□□□□ -0.19
CSPG4P13-201ENST00000565545 FRZBQ92765 325 aa13.86□□□□□ -0.19
CSPG4P13-201ENST00000565545 MRPL18Q9H0U6 180 aaKnown RBP13.86□□□□□ -0.19
CSPG4P13-201ENST00000565545 UBE2CO00762 179 aa13.85□□□□□ -0.19
CSPG4P13-201ENST00000565545 NXPH4O95158 308 aa13.85□□□□□ -0.19
CSPG4P13-201ENST00000565545 ZNF415Q09FC8 603 aa13.85□□□□□ -0.19
CSPG4P13-201ENST00000565545 FABP9Q0Z7S8 132 aa13.85□□□□□ -0.19
CSPG4P13-201ENST00000565545 MDFICQ9P1T7 246 aa13.85□□□□□ -0.19
CSPG4P13-201ENST00000565545 TIMM8BQ9Y5J9 83 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P13-201ENST00000565545 COL7A1Q02388 2944 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 PHOX2AO14813 284 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 APCSP02743 223 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 IGHV4-30-4P0DP06 118 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 ZNF705AQ6ZN79 300 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 SMIM15Q7Z3B0 74 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 SYT8Q8NBV8 401 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 SPXQ9BT56 116 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 TMEM191AQ9H0A3 160 aa13.84□□□□□ -0.19
CSPG4P13-201ENST00000565545 DNAH9Q9NYC9 4486 aa13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 TRGC1P0CF51 173 aa13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 NHLRC4P0CG21 123 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 HTN1P15515 57 aa13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 PTH2Q96A98 100 aa13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 U3KQK5 164 aa13.83□□□□□ -0.2
CSPG4P13-201ENST00000565545 IGHV3OR16-12A0A075B7B8 117 aa13.82□□□□□ -0.2
CSPG4P13-201ENST00000565545 PIK3CD-AS1Q5SR53 167 aa13.82□□□□□ -0.2
CSPG4P13-201ENST00000565545 M0R381 172 aa13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 SSTP61278 116 aa13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 DMRTA1Q5VZB9 504 aa13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 C11orf72Q8NBR9 251 aa13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 TMEM263Q8WUH6 116 aaKnown RBP13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 MSRB1Q9NZV6 116 aa13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 TMA7Q9Y2S6 64 aaKnown RBP13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 MUC4Q99102 2169 aa13.81□□□□□ -0.2
CSPG4P13-201ENST00000565545 SMIM9A6NGZ8 99 aa13.8□□□□□ -0.2
CSPG4P13-201ENST00000565545 SLAQ13239 276 aa13.8□□□□□ -0.2
CSPG4P13-201ENST00000565545 FAM104BQ5XKR9 115 aa13.8□□□□□ -0.2
CSPG4P13-201ENST00000565545 C16orf74Q96GX8 76 aa13.8□□□□□ -0.2
CSPG4P13-201ENST00000565545 M0R2P5 195 aa13.79□□□□□ -0.2
CSPG4P13-201ENST00000565545 RRN3P1Q2M238 152 aa13.79□□□□□ -0.2
CSPG4P13-201ENST00000565545 RNASE8Q8TDE3 154 aaKnown RBP13.79□□□□□ -0.2
CSPG4P13-201ENST00000565545 AP1S3Q96PC3 154 aa13.79□□□□□ -0.2
CSPG4P13-201ENST00000565545 RCHY1Q96PM5 261 aa13.79□□□□□ -0.2
CSPG4P13-201ENST00000565545 NDUFAF3Q9BU61 184 aa13.79□□□□□ -0.2
CSPG4P13-201ENST00000565545 GSN-AS1Q9NRJ2 163 aa13.78□□□□□ -0.2
CSPG4P13-201ENST00000565545 HIST1H2BKO60814 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BJP06899 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 AZU1P20160 251 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BOP23527 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BBP33778 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BDP58876 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BCP62807 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST2H2BEQ16778 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 Q6ZWC4 215 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BHQ93079 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BNQ99877 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 HIST1H2BMQ99879 126 aa13.77□□□□□ -0.21
CSPG4P13-201ENST00000565545 PRM2P04554 102 aa13.76□□□□□ -0.21
CSPG4P13-201ENST00000565545 EVI2AP22794 236 aa13.76□□□□□ -0.21
CSPG4P13-201ENST00000565545 ZNF876PQ49A33 203 aa13.76□□□□□ -0.21
CSPG4P13-201ENST00000565545 IL17DQ8TAD2 202 aa13.76□□□□□ -0.21
CSPG4P13-201ENST00000565545 DPH3P1Q9H4G8 78 aa13.76□□□□□ -0.21
CSPG4P13-201ENST00000565545 C3orf84H3BNL1 204 aa13.75□□□□□ -0.21
CSPG4P13-201ENST00000565545 SPRY2O43597 315 aa13.75□□□□□ -0.21
CSPG4P13-201ENST00000565545 PPBPP02775 128 aa13.75□□□□□ -0.21
CSPG4P13-201ENST00000565545 SMIM17P0DL12 118 aa13.75□□□□□ -0.21
CSPG4P13-201ENST00000565545 RAB4AP20338 218 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms