RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SHANK2-AS3Q9BTD1 123 aa3.92□□□□□ -1.78
CAPN3-214ENST00000565274 RABAC1Q9UI14 185 aa3.92□□□□□ -1.78
CAPN3-214ENST00000565274 EPDR1Q9UM22 224 aa3.92□□□□□ -1.78
CAPN3-214ENST00000565274 WDFY4Q6ZS81 3184 aa3.92□□□□□ -1.78
CAPN3-214ENST00000565274 VPS13AQ96RL7 3174 aa3.92□□□□□ -1.78
CAPN3-214ENST00000565274 MYO15AQ9UKN7 3530 aa3.92□□□□□ -1.78
CAPN3-214ENST00000565274 TET2Q6N021 2002 aaPredicted RBP3.92□□□□□ -1.78
CAPN3-214ENST00000565274 OTOGLQ3ZCN5 2332 aa3.92□□□□□ -1.78
CAPN3-214ENST00000565274 TRAV12-2A0A075B6T6 113 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 TRAV13-1A0A0B4J241 112 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 TRBV7-6A0A0J9YX20 115 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 WI2-2373I1.2A0A1W2PRP0 233 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 F5H697 171 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 C16orf97H3BN30 126 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 APOMO95445 188 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 LTAP01374 205 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 PYYP10082 97 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 HLA-DMBP28068 263 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 WT1-ASQ06250 92 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 PAX8Q06710 450 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 LINC00173Q6ZV60 143 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 C2orf91Q6ZV80 131 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 Q86TA4 180 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 INTS1Q8N201 2190 aaKnown RBP3.91□□□□□ -1.78
CAPN3-214ENST00000565274 FAM216BQ8N7L0 139 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 WFDC11Q8NEX6 87 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 PPDPFLQ8WWR9 84 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 LEAP2Q969E1 77 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 LINC00479Q96M42 142 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 TMEM14CQ9P0S9 112 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
CAPN3-214ENST00000565274 HCFC1P51610 2035 aa3.9□□□□□ -1.78
CAPN3-214ENST00000565274 DSCAML1Q8TD84 2053 aa3.9□□□□□ -1.78
CAPN3-214ENST00000565274 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 NDUFB3O43676 98 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 IGLV1-47P01700 117 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 TRACP01848 142 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 RIGQ13278 110 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 PIK3CD-AS1Q5SR53 167 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 BPIFA4PQ86YQ2 179 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 LYPD1Q8N2G4 141 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 DEFB124Q8NES8 71 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 NTN5Q8WTR8 489 aaPredicted RBP3.9□□□□□ -1.79
CAPN3-214ENST00000565274 GTSF1Q8WW33 167 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 CCL17Q92583 94 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 RAB37Q96AX2 223 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 PRR14LQ5THK1 2151 aa3.9□□□□□ -1.79
CAPN3-214ENST00000565274 DSCAMO60469 2012 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 TNCP24821 2201 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 CADP27708 2225 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 SMIM26A0A096LP01 95 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 E7EUB6 86 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 IGHV3-7P01780 117 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 TCRAP04437 139 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 ZNF688P0C7X2 276 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 IGHV1-8P0DP01 117 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 COX7CP15954 63 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 CSN1S1P47710 185 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 DAD1P61803 113 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 ERCC8Q13216 396 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 KLK9Q2XQG4 91 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 LGALS9BQ3B8N2 356 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 FBXL19-AS1Q494R0 122 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 LGALS9CQ6DKI2 356 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 SCGB1D4Q6XE38 83 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 LINC00322Q6ZN03 302 aaPredicted RBP3.89□□□□□ -1.79
CAPN3-214ENST00000565274 LINC00305Q7Z4B0 112 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 GTSCR1Q86UQ5 136 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 DEFB108BQ8NET1 73 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 RNASE6Q93091 150 aaKnown RBP3.89□□□□□ -1.79
CAPN3-214ENST00000565274 PGLYRP4Q96LB8 373 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 KLK9Q9UKQ9 250 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
CAPN3-214ENST00000565274 EP300Q09472 2414 aaPredicted RBP3.89□□□□□ -1.79
CAPN3-214ENST00000565274 PLCE1Q9P212 2302 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 PGPA6NDG6 321 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 A8MWV9 139 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 RPL27AP46776 148 aaKnown RBP3.88□□□□□ -1.79
CAPN3-214ENST00000565274 CACNG7P62955 275 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 GAGE13Q4V321 117 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 RPRMLQ8N4K4 120 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 RNF182Q8N6D2 247 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 NEXN-AS1Q8NBZ9 246 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 DCANP1Q8TF63 244 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 TMEM158Q8WZ71 300 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 BBC3Q96PG8 261 aaPredicted RBP3.88□□□□□ -1.79
CAPN3-214ENST00000565274 METTL26Q96S19 204 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 DSCR8Q96T75 97 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 Q9H3A6 140 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 MRPL36Q9P0J6 103 aaKnown RBP3.88□□□□□ -1.79
CAPN3-214ENST00000565274 F11RQ9Y624 299 aaKnown RBP3.88□□□□□ -1.79
CAPN3-214ENST00000565274 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 DIDO1Q9BTC0 2240 aaKnown RBP3.88□□□□□ -1.79
CAPN3-214ENST00000565274 URB1O60287 2271 aaKnown RBP3.88□□□□□ -1.79
CAPN3-214ENST00000565274 SPEGQ15772 3267 aa3.88□□□□□ -1.79
CAPN3-214ENST00000565274 HEATR1Q9H583 2144 aaKnown RBP3.88□□□□□ -1.79
CAPN3-214ENST00000565274 A0A096LNJ9 63 aa3.87□□□□□ -1.79
CAPN3-214ENST00000565274 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms