RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-208	ENST00000563688	AKAP14	Q86UN6	197 aa		0.43	□□□□□ -2.34
SCAPER-208	ENST00000563688	PPP1R1C	Q8WVI7	109 aa		0.43	□□□□□ -2.34
SCAPER-208	ENST00000563688	COA4	Q9NYJ1	87 aa		0.43	□□□□□ -2.34
SCAPER-208	ENST00000563688	KDM5C	P41229	1560 aa		0.43	□□□□□ -2.34
SCAPER-208	ENST00000563688	CACNA1H	O95180	2353 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	TPR	P12270	2363 aa	Known RBP	0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	BLM	P54132	1417 aa	Predicted RBP	0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	TRAV2	A0A0B4J234	112 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	YPEL1	O60688	119 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	TFF1	P04155	84 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	SNX29P2	Q8IUI4	249 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	ATP6V0E2	Q8NHE4	81 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	PYDC1	Q8WXC3	89 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	TMEM141	Q96I45	108 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	NOP16	Q9Y3C1	178 aa	Known RBP	0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	MEGF8	Q7Z7M0	2845 aa		0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	KIAA0100	Q14667	2235 aa	Known RBP	0.42	□□□□□ -2.34
SCAPER-208	ENST00000563688	ARAP1	Q96P48	1450 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	PHGR1	C9JFL3	82 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	MPC1L	P0DKB6	136 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	CLLU1	Q5K131	121 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	SPINK6	Q6UWN8	80 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	DSCR8	Q96T75	97 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	ANKRD30A	Q9BXX3	1397 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	IGF2R	P11717	2491 aa		0.41	□□□□□ -2.34
SCAPER-208	ENST00000563688	CCDC171	Q6TFL3	1326 aa		0.4	□□□□□ -2.34
SCAPER-208	ENST00000563688	TANC1	Q9C0D5	1861 aa		0.4	□□□□□ -2.35
SCAPER-208	ENST00000563688	F5	P12259	2224 aa		0.4	□□□□□ -2.35
SCAPER-208	ENST00000563688	CXorf51A	A0A1B0GTR3	108 aa		0.4	□□□□□ -2.35
SCAPER-208	ENST00000563688	SCGB1A1	P11684	91 aa		0.4	□□□□□ -2.35
SCAPER-208	ENST00000563688	DYNLRB2	Q8TF09	96 aa		0.4	□□□□□ -2.35
SCAPER-208	ENST00000563688	FRAS1	Q86XX4	4008 aa		0.4	□□□□□ -2.35
SCAPER-208	ENST00000563688		A0A096LNT2	108 aa		0.39	□□□□□ -2.35
SCAPER-208	ENST00000563688	BET1L	Q9NYM9	111 aa		0.39	□□□□□ -2.35
SCAPER-208	ENST00000563688	CASZ1	Q86V15	1759 aa		0.39	□□□□□ -2.35
SCAPER-208	ENST00000563688	PLXNA2	O75051	1894 aa		0.39	□□□□□ -2.35
SCAPER-208	ENST00000563688	MDN1	Q9NU22	5596 aa		0.39	□□□□□ -2.35
SCAPER-208	ENST00000563688	MYH13	Q9UKX3	1938 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	CDK5RAP2	Q96SN8	1893 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	UHRF1BP1L	A0JNW5	1464 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	TRAV12-2	A0A075B6T6	113 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	TCRBV3S1	A0A5B6	114 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	ZNF670-ZNF695	F2Z2N8	137 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	PYY	P10082	97 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	SLC25A6	P12236	298 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	MORN2	Q502X0	79 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	ATP11AUN	Q6ZP68	121 aa		0.38	□□□□□ -2.35
SCAPER-208	ENST00000563688	CAD	P27708	2225 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	TTC28	Q96AY4	2481 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	KIF13A	Q9H1H9	1805 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688		J3QLW9	94 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	NCS1	P62166	190 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	MMGT1	Q8N4V1	131 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	BATF3	Q9NR55	127 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	ABCA12	Q86UK0	2595 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	F8	P00451	2351 aa		0.37	□□□□□ -2.35
SCAPER-208	ENST00000563688	ZFYVE26	Q68DK2	2539 aa		0.36	□□□□□ -2.35
SCAPER-208	ENST00000563688	MAP2	P11137	1827 aa	Known RBP	0.36	□□□□□ -2.35
SCAPER-208	ENST00000563688	MCRIP1	C9JLW8	97 aa		0.36	□□□□□ -2.35
SCAPER-208	ENST00000563688	LSM2	Q9Y333	95 aa	Known RBP	0.36	□□□□□ -2.35
SCAPER-208	ENST00000563688	MAST4	O15021	2626 aa		0.36	□□□□□ -2.35
SCAPER-208	ENST00000563688		F2Z2F3	143 aa		0.35	□□□□□ -2.35
SCAPER-208	ENST00000563688	ELOF1	P60002	83 aa	Known RBP	0.35	□□□□□ -2.35
SCAPER-208	ENST00000563688	CYP2G1P	Q6ZSU1	146 aa		0.35	□□□□□ -2.35
SCAPER-208	ENST00000563688	NDUFA11	Q86Y39	141 aa		0.35	□□□□□ -2.35
SCAPER-208	ENST00000563688	IFI27L1	Q96BM0	104 aa		0.35	□□□□□ -2.35
SCAPER-208	ENST00000563688	ERG28	Q9UKR5	140 aa		0.35	□□□□□ -2.35
SCAPER-208	ENST00000563688	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.35	□□□□□ -2.35
SCAPER-208	ENST00000563688	DOCK11	Q5JSL3	2073 aa		0.34	□□□□□ -2.35
SCAPER-208	ENST00000563688	PIEZO1	Q92508	2521 aa		0.34	□□□□□ -2.35
SCAPER-208	ENST00000563688	CCDC179	H3BU77	68 aa		0.34	□□□□□ -2.36
SCAPER-208	ENST00000563688		M0R2P5	195 aa		0.34	□□□□□ -2.36
SCAPER-208	ENST00000563688	EMX2	Q04743	252 aa		0.34	□□□□□ -2.36
SCAPER-208	ENST00000563688	OR2T2	Q6IF00	324 aa		0.34	□□□□□ -2.36
SCAPER-208	ENST00000563688	VMO1	Q7Z5L0	202 aa		0.34	□□□□□ -2.36
SCAPER-208	ENST00000563688	LZIC	Q8WZA0	190 aa		0.34	□□□□□ -2.36
SCAPER-208	ENST00000563688	SYNJ1	O43426	1573 aa		0.33	□□□□□ -2.36
SCAPER-208	ENST00000563688	TRBV20-1	A0A075B6N2	111 aa		0.33	□□□□□ -2.36
SCAPER-208	ENST00000563688	RBAKDN	A6NC62	111 aa		0.33	□□□□□ -2.36
SCAPER-208	ENST00000563688	CKS1B	P61024	79 aa		0.33	□□□□□ -2.36
SCAPER-208	ENST00000563688	HIST1H1A	Q02539	215 aa	Predicted RBP	0.33	□□□□□ -2.36
SCAPER-208	ENST00000563688	PRR15L	Q9BU68	103 aa		0.33	□□□□□ -2.36
SCAPER-208	ENST00000563688	PROK2	Q9HC23	129 aa		0.32	□□□□□ -2.36
SCAPER-208	ENST00000563688	MYH6	P13533	1939 aa		0.32	□□□□□ -2.36
SCAPER-208	ENST00000563688	UNC13A	Q9UPW8	1703 aa		0.31	□□□□□ -2.36
SCAPER-208	ENST00000563688		J3QR89	54 aa		0.31	□□□□□ -2.36
SCAPER-208	ENST00000563688	SMIM3	Q9BZL3	60 aa		0.31	□□□□□ -2.36
SCAPER-208	ENST00000563688	SAR1A	Q9NR31	198 aa		0.31	□□□□□ -2.36
SCAPER-208	ENST00000563688	GSKIP	Q9P0R6	139 aa		0.31	□□□□□ -2.36
SCAPER-208	ENST00000563688	OVOS2	A0A0J9YW53	1432 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	OVOS2	Q6IE36	1432 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	ERCC6	Q03468	1493 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	AHNAK	Q09666	5890 aa	Known RBP	0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	ARPC5	O15511	151 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	IGLC6	P0CF74	106 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	BPESC1	Q9GZL8	116 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	POLQ	O75417	2590 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	ZNF142	P52746	1687 aa	Predicted RBP	0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	ARHGEF10	O15013	1369 aa		0.3	□□□□□ -2.36
SCAPER-208	ENST00000563688	PLXNA1	Q9UIW2	1896 aa		0.29	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms