RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PMCHL1Q16048 86 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 SPATA45Q537H7 98 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 MIC13Q5XKP0 118 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 C12orf73Q69YU5 71 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 C7orf65Q6ZTY9 151 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 MIR17HGQ75NE6 70 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 OR5AS1Q8N127 324 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 SIGLECL1Q8N7X8 197 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 C15orf53Q8NAA6 179 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 WFDC5Q8TCV5 224 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 SPACA4Q8TDM5 124 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 C10orf105Q8TEF2 133 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 SPTSSAQ969W0 71 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 TMEM242Q9NWH2 141 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 GOLGA3Q08378 1498 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 PIK3C2AO00443 1686 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 LTN1O94822 1766 aa1.41□□□□□ -2.18
SHCBP1-202ENST00000563219 TOPBP1Q92547 1522 aa1.4□□□□□ -2.18
SHCBP1-202ENST00000563219 RIMBP3CA6NJZ7 1639 aa1.4□□□□□ -2.18
SHCBP1-202ENST00000563219 RIMBP3BA6NNM3 1639 aa1.4□□□□□ -2.18
SHCBP1-202ENST00000563219 RIMBP3Q9UFD9 1639 aa1.4□□□□□ -2.18
SHCBP1-202ENST00000563219 MYH1P12882 1939 aa1.4□□□□□ -2.18
SHCBP1-202ENST00000563219 PCDH15Q96QU1 1955 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 QRICH2Q9H0J4 1663 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 A0A087WWC5 75 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 IGKV1-9A0A0C4DH69 117 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 A0A1W2PPM0 123 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 RBAKDNA6NC62 111 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 C19orf84I3L1E1 186 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 SDCBPO00560 298 aaPredicted RBP1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 LYRM1O43325 122 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 TIMM17BO60830 172 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 SIX6O95475 246 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 TCL1BO95988 128 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 NFYAP23511 347 aaPredicted RBP1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 KRTAP12-1P59990 96 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 KRTAP12-3P60328 96 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 SOSTDC1Q6X4U4 206 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 FAM216BQ8N7L0 139 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 OR8B3Q8NGG8 313 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 PPDPFLQ8WWR9 84 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 DIRC1Q969H9 104 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 LSM10Q969L4 123 aaKnown RBP1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 CXCL16Q9H2A7 254 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 DPH3P1Q9H4G8 78 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 TCHHQ07283 1943 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 KIF13AQ9H1H9 1805 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 SPHKAPQ2M3C7 1700 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 KNDC1Q76NI1 1749 aa1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 TOP2AP11388 1531 aaKnown RBP1.4□□□□□ -2.19
SHCBP1-202ENST00000563219 PPLO60437 1756 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 RGPD4Q7Z3J3 1758 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 FRMPD1Q5SYB0 1578 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 COL1A1P02452 1464 aaPredicted RBP1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 MICAL3Q7RTP6 2002 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 FANCMQ8IYD8 2048 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 MYH6P13533 1939 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 MYH8P13535 1937 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 DENND4CQ5VZ89 1909 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 IGKV1D-42A0A075B6H8 117 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 TRAV3A0A0B4J244 114 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 IGHV1-24A0A0C4DH33 117 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 C7orf77A4D0Y5 90 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 H3BUT2 72 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 J3QLW9 94 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 IGKCP01834 107 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 CRPP02741 224 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 SAA1P0DJI8 122 aaPredicted RBP1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 CBLN1P23435 193 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 RNASE4P34096 147 aaKnown RBP1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 SMIM11AP58511 58 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 CCL8P80075 99 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 DEFB103AP81534 67 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 ZNF345Q14585 488 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 SPRNQ5BIV9 151 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 BVES-AS1Q5T3Y7 98 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 ATP11AUNQ6ZP68 121 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 SMIM5Q71RC9 77 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 SBSPONQ8IVN8 264 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 DYNAPQ8N1N2 210 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 C3orf56Q8N813 242 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 PFN4Q8NHR9 129 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 CHCHD1Q96BP2 118 aaKnown RBP1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 ZNF625Q96I27 306 aaPredicted RBP1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 DSCR8Q96T75 97 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 C20orf78Q9BR46 151 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 NHP2Q9NX24 153 aaKnown RBP1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 MARF1Q9Y4F3 1742 aaKnown RBP1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 PREX2Q70Z35 1606 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 CC2D2AQ9P2K1 1620 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 ABCC2Q92887 1545 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 DUOX2Q9NRD8 1548 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 STRCP1A6NGW2 1772 aa1.39□□□□□ -2.19
SHCBP1-202ENST00000563219 MED1Q15648 1581 aaPredicted RBP1.38□□□□□ -2.19
SHCBP1-202ENST00000563219 SBF2Q86WG5 1849 aa1.38□□□□□ -2.19
SHCBP1-202ENST00000563219 DOCK4Q8N1I0 1966 aa1.38□□□□□ -2.19
SHCBP1-202ENST00000563219 TNRC6AQ8NDV7 1962 aaKnown RBP1.38□□□□□ -2.19
SHCBP1-202ENST00000563219 ABCA9Q8IUA7 1624 aa1.38□□□□□ -2.19
SHCBP1-202ENST00000563219 TRAV2A0A0B4J234 112 aa1.38□□□□□ -2.19
SHCBP1-202ENST00000563219 LOC107984156A0A0G2JMH3 177 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms