RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PRSS29PA6NIE9 313 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 IGHV4-38-2P0DP08 117 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 FAM159AQ6UWV7 190 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 PRORYQ9H606 182 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 CYSLTR1Q9Y271 337 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 WNK2Q9Y3S1 2297 aa9.84□□□□□ -0.83
USB1-207ENST00000563149 PTPRZ1P23471 2315 aaPredicted RBP9.84□□□□□ -0.83
USB1-207ENST00000563149 DCHS2Q6V1P9 2916 aa9.83□□□□□ -0.84
USB1-207ENST00000563149 F6UB75 175 aa9.83□□□□□ -0.84
USB1-207ENST00000563149 LINC00315P59091 139 aa9.83□□□□□ -0.84
USB1-207ENST00000563149 CFHR3Q02985 330 aa9.83□□□□□ -0.84
USB1-207ENST00000563149 CLEC2AQ6UVW9 174 aa9.83□□□□□ -0.84
USB1-207ENST00000563149 HRNRQ86YZ3 2850 aaPredicted RBP9.83□□□□□ -0.84
USB1-207ENST00000563149 LRBAP50851 2863 aa9.83□□□□□ -0.84
USB1-207ENST00000563149 LGALS1P09382 135 aaKnown RBP9.83□□□□□ -0.84
USB1-207ENST00000563149 POLR2KP53803 58 aaKnown RBP9.83□□□□□ -0.84
USB1-207ENST00000563149 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
USB1-207ENST00000563149 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 A6NJY4 79 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 VCYO14598 125 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 GNLYP22749 145 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 DEFB1P60022 68 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 BLCAPP62952 87 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 RRN3P1Q2M238 152 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 CCL19Q99731 98 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
USB1-207ENST00000563149 TACC2O95359 2948 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 TMEM89A2RUT3 159 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 SPRY2O43597 315 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 MSMBP08118 114 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 HERVK_113P61574 105 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 DCANP1Q8TF63 244 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 DCHS1Q96JQ0 3298 aa9.81□□□□□ -0.84
USB1-207ENST00000563149 HOXA3O43365 443 aaPredicted RBP9.8□□□□□ -0.84
USB1-207ENST00000563149 RIPPLY3P57055 190 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 SCGB2A2Q13296 93 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 TIMM17AQ99595 171 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 KIR2DL4Q99706 377 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 IGKV3-7A0A075B6H7 116 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 IGIPA6NJ69 53 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 J3QR89 54 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 LGALS9O00182 355 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 CRYGDP07320 174 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 COX6B1P14854 86 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 RPL24P83731 157 aaKnown RBP9.8□□□□□ -0.84
USB1-207ENST00000563149 PMVKQ15126 192 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 ZFP2Q6ZN57 461 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
USB1-207ENST00000563149 ZNF815PA8K554 130 aa9.79□□□□□ -0.84
USB1-207ENST00000563149 DUSP14O95147 198 aaKnown RBP9.79□□□□□ -0.84
USB1-207ENST00000563149 GATA3P23771 443 aa9.79□□□□□ -0.84
USB1-207ENST00000563149 SUMO4Q6EEV6 95 aa9.79□□□□□ -0.84
USB1-207ENST00000563149 TP53TG1Q9Y2A0 90 aa9.79□□□□□ -0.84
USB1-207ENST00000563149 TEX48A0A1B0GUV7 120 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 CD7P09564 240 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 Q6ZS46 218 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 SYT8Q8NBV8 401 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 C9orf85Q96MD7 179 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 TSHBP01222 138 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 PSMB8P28062 276 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 ATP5J2P56134 94 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
USB1-207ENST00000563149 IGHV4-30-2A0A087WSY4 118 aa9.77□□□□□ -0.85
USB1-207ENST00000563149 C11orf86A6NJI1 115 aa9.77□□□□□ -0.85
USB1-207ENST00000563149 B4DSR2 109 aa9.77□□□□□ -0.85
USB1-207ENST00000563149 GAGE13Q4V321 117 aa9.77□□□□□ -0.85
USB1-207ENST00000563149 LCNL1Q6ZST4 164 aa9.77□□□□□ -0.85
USB1-207ENST00000563149 TRAV12-3A0A0B4J271 114 aa9.76□□□□□ -0.85
USB1-207ENST00000563149 SDHAF1A6NFY7 115 aa9.76□□□□□ -0.85
USB1-207ENST00000563149 SRD5A1P18405 259 aa9.76□□□□□ -0.85
USB1-207ENST00000563149 UBE2D1P51668 147 aa9.76□□□□□ -0.85
USB1-207ENST00000563149 DSCR9P59020 149 aa9.76□□□□□ -0.85
USB1-207ENST00000563149 SNRPD3P62318 126 aaKnown RBP9.76□□□□□ -0.85
USB1-207ENST00000563149 RNF152Q8N8N0 203 aa9.76□□□□□ -0.85
USB1-207ENST00000563149 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
USB1-207ENST00000563149 SPTBN2O15020 2390 aa9.76□□□□□ -0.85
USB1-207ENST00000563149 IGHV3-16A0A0C4DH30 117 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 A0A0J9YX75 114 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 F5H697 171 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 H3BMG7 143 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
USB1-207ENST00000563149 RHOHQ15669 191 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 MORN3Q6PF18 240 aaPredicted RBP9.75□□□□□ -0.85
USB1-207ENST00000563149 K7EQG2 157 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 WFDC2Q14508 124 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 CD300EQ496F6 205 aaPredicted RBP9.75□□□□□ -0.85
USB1-207ENST00000563149 ZNF876PQ49A33 203 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 LYRM7Q5U5X0 104 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 JPT2Q9H910 190 aa9.75□□□□□ -0.85
USB1-207ENST00000563149 NSUN5P1Q3KNT7 163 aa9.74□□□□□ -0.85
USB1-207ENST00000563149 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
USB1-207ENST00000563149 PLEKHB2Q96CS7 222 aa9.74□□□□□ -0.85
USB1-207ENST00000563149 PGPEP1Q9NXJ5 209 aa9.74□□□□□ -0.85
USB1-207ENST00000563149 PRO0461Q9UI25 63 aa9.74□□□□□ -0.85
USB1-207ENST00000563149 MUC4Q99102 2169 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms